RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CGB2Q6NT52 195 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.72■□□□□ 0.43
CTSB-228ENST00000533455 CBWD2Q8IUF1 395 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 BBOF1Q8ND07 529 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 ATL2Q8NHH9 583 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 TMC2Q8TDI7 906 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 PARD3BQ8TEW8 1205 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 ATG4AQ8WYN0 398 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 GRAMD1AQ96CP6 724 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 FAM81BQ96LP2 452 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 TGS1Q96RS0 853 aaKnown RBP17.72■□□□□ 0.43
CTSB-228ENST00000533455 CSRNP1Q96S65 589 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 TDRD3Q9H7E2 651 aaKnown RBP17.72■□□□□ 0.43
CTSB-228ENST00000533455 TRPC5Q9UL62 973 aaPredicted RBP17.72■□□□□ 0.43
CTSB-228ENST00000533455 GOLGA8IPA6NC78 632 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 GOLGA8JA6NMD2 632 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 SLC16A4O15374 487 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 CDH16O75309 829 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 CCNB1P14635 433 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 CCND1P24385 295 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 GTF2H1P32780 548 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 STX2P32856 288 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 QARSP47897 775 aaKnown RBP17.72■□□□□ 0.43
CTSB-228ENST00000533455 STRN3Q13033 797 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 TNIP1Q15025 636 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 MTFR1Q15390 333 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 GRIPAP1Q4V328 841 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 FAM160B2Q86V87 743 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 FITM2Q8N6M3 262 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 FAM212AQ96EL1 285 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 DDX27Q96GQ7 796 aaKnown RBP17.72■□□□□ 0.43
CTSB-228ENST00000533455 HERPUD2Q9BSE4 406 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 QTRT2Q9H974 415 aaKnown RBP17.72■□□□□ 0.43
CTSB-228ENST00000533455 KCNH7Q9NS40 1196 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 NOP53Q9NZM5 478 aaKnown RBP17.72■□□□□ 0.43
CTSB-228ENST00000533455 GGT7Q9UJ14 662 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 EXOC7Q9UPT5 735 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 CEP83Q9Y592 693 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 MROH7Q68CQ1 1323 aa17.72■□□□□ 0.43
CTSB-228ENST00000533455 ECE2O60344 883 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 ANP32DO95626 131 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 GH1P01241 217 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 MYBL1P10243 752 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 UNGP13051 313 aaPredicted RBP17.71■□□□□ 0.43
CTSB-228ENST00000533455 ADSSP30520 456 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 MYO1EQ12965 1108 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 STAT4Q14765 748 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 PPP1R21Q6ZMI0 780 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 LDHDQ86WU2 507 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 CYP4X1Q8N118 509 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 RIBC1Q8N443 379 aaPredicted RBP17.71■□□□□ 0.43
CTSB-228ENST00000533455 FBXL13Q8NEE6 735 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 GDAP1Q8TB36 358 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 NSMCE1Q8WV22 266 aa17.71■□□□□ 0.43
CTSB-228ENST00000533455 MOV10L1Q9BXT6 1211 aaKnown RBP17.71■□□□□ 0.43
CTSB-228ENST00000533455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.71■□□□□ 0.437e-9■■■■■ 48.8
CTSB-228ENST00000533455 KRT16P08779 473 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 ABHD2P08910 425 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 CETPP11597 493 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 PEX3P56589 373 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 KLF1Q13351 362 aaPredicted RBP17.71■□□□□ 0.42
CTSB-228ENST00000533455 ENOSF1Q7L5Y1 443 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 MAP4K3Q8IVH8 894 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 MCOLN2Q8IZK6 566 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 TRIM11Q96F44 468 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 MASTLQ96GX5 879 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.71■□□□□ 0.423e-7■□□□□ 9.8
CTSB-228ENST00000533455 MLXIPLQ9NP71 852 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 RAB20Q9NX57 234 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 NKIRAS1Q9NYS0 192 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 PNMA3Q9UL41 463 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 NAALADL1Q9UQQ1 740 aa17.71■□□□□ 0.42
CTSB-228ENST00000533455 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.71■□□□□ 0.42
CTSB-228ENST00000533455 ADCY8P40145 1251 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 ENPEPQ07075 957 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 MKRN4PQ13434 485 aaPredicted RBP17.7■□□□□ 0.42
CTSB-228ENST00000533455 CC2D2BQ6DHV5 1058 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 CEP128Q6ZU80 1094 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 TAS1R2Q8TE23 839 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 DHX38Q92620 1227 aaKnown RBP17.7■□□□□ 0.42
CTSB-228ENST00000533455 RMDN2Q96LZ7 410 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 MFSD14AQ96MC6 490 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 FBXL18Q96ME1 805 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 FOXP3Q9BZS1 431 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 TRIM7Q9C029 511 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 AGO4Q9HCK5 861 aaKnown RBP17.7■□□□□ 0.42
CTSB-228ENST00000533455 KLHL14Q9P2G3 628 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 R3HDM2Q9Y2K5 976 aaKnown RBP17.7■□□□□ 0.42
CTSB-228ENST00000533455 L3MBTL1Q9Y468 752 aa17.7■□□□□ 0.42
CTSB-228ENST00000533455 WFS1O76024 890 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 TAC1P20366 129 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 SCP2P22307 547 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 YWHABP31946 246 aaKnown RBP17.69■□□□□ 0.42
CTSB-228ENST00000533455 MSH2P43246 934 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 GCNT1Q02742 428 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 MGAT5Q09328 741 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 LLGL1Q15334 1064 aa17.69■□□□□ 0.42
CTSB-228ENST00000533455 TRIP13Q15645 432 aaPredicted RBP17.69■□□□□ 0.42
CTSB-228ENST00000533455 ZKSCAN8Q15776 578 aaPredicted RBP17.69■□□□□ 0.42
CTSB-228ENST00000533455 CCNG2Q16589 344 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms