RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 ASIC4Q96FT7 647 aa25.65■■□□□ 1.7
SMPD1-209ENST00000533196 CLSTN3Q9BQT9 956 aa25.65■■□□□ 1.7
SMPD1-209ENST00000533196 REEP2Q9BRK0 252 aa25.65■■□□□ 1.7
SMPD1-209ENST00000533196 PARVGQ9HBI0 331 aa25.65■■□□□ 1.7
SMPD1-209ENST00000533196 LIMD1Q9UGP4 676 aa25.65■■□□□ 1.7
SMPD1-209ENST00000533196 FBXW11Q9UKB1 542 aa25.65■■□□□ 1.7
SMPD1-209ENST00000533196 DOCK8Q8NF50 2099 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 NPHP3-ACAD11A0A0J9YXS1 232 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 CLDN3O15551 220 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 RFPL2O75678 378 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 ZMYND10O75800 440 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 PLCG1P19174 1290 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 RPL9P32969 192 aaKnown RBP25.64■■□□□ 1.7
SMPD1-209ENST00000533196 GRIN1Q05586 938 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 MCL1Q07820 350 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 KARSQ15046 597 aaKnown RBP25.64■■□□□ 1.7
SMPD1-209ENST00000533196 PTPAQ15257 358 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 GLYCTKQ8IVS8 523 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 FBXL6Q8N531 539 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 FEZF2Q8TBJ5 459 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 ZNF707Q96C28 371 aaPredicted RBP25.64■■□□□ 1.7
SMPD1-209ENST00000533196 ZBTB45Q96K62 511 aaPredicted RBP25.64■■□□□ 1.7
SMPD1-209ENST00000533196 PRKD2Q9BZL6 878 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 ANKFY1Q9P2R3 1169 aa25.64■■□□□ 1.7
SMPD1-209ENST00000533196 MORC2Q9Y6X9 1032 aaPredicted RBP25.64■■□□□ 1.7
SMPD1-209ENST00000533196 FAM13AO94988 1023 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 SPATA31D3P0C874 917 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 CACNB1Q02641 598 aaPredicted RBP25.63■■□□□ 1.69
SMPD1-209ENST00000533196 RESTQ13127 1097 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 KYAT1Q16773 422 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 CD300LGQ6UXG3 332 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 SPATA31D4Q6ZUB0 917 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 RTL10Q7L3V2 364 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 LARP4BQ92615 738 aaKnown RBP25.63■■□□□ 1.69
SMPD1-209ENST00000533196 PRRX2Q99811 253 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 CCDC39Q9UFE4 941 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 BACE2Q9Y5Z0 518 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 CLIC4Q9Y696 253 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 CLUHO75153 1309 aa25.63■■□□□ 1.69
SMPD1-209ENST00000533196 K7ELQ4 463 aaPredicted RBP25.62■■□□□ 1.69
SMPD1-209ENST00000533196 KRT18P05783 430 aaKnown RBP25.62■■□□□ 1.69
SMPD1-209ENST00000533196 HNRNPA1P09651 372 aaKnown RBP eCLIP25.62■■□□□ 1.69
SMPD1-209ENST00000533196 HARSP12081 509 aaKnown RBP25.62■■□□□ 1.69
SMPD1-209ENST00000533196 DDIT3P35638 169 aa25.62■■□□□ 1.69
SMPD1-209ENST00000533196 SOX4Q06945 474 aaPredicted RBP25.62■■□□□ 1.69
SMPD1-209ENST00000533196 RAB33AQ14088 237 aa25.62■■□□□ 1.69
SMPD1-209ENST00000533196 MCM6Q14566 821 aa25.62■■□□□ 1.69
SMPD1-209ENST00000533196 ANKS3Q6ZW76 656 aa25.62■■□□□ 1.69
SMPD1-209ENST00000533196 MYCT1Q8N699 235 aa25.62■■□□□ 1.69
SMPD1-209ENST00000533196 LRRC15Q8TF66 581 aa25.62■■□□□ 1.69
SMPD1-209ENST00000533196 ZMAT2Q96NC0 199 aaKnown RBP25.62■■□□□ 1.69
SMPD1-209ENST00000533196 PLEKHA5Q9HAU0 1116 aa25.62■■□□□ 1.69
SMPD1-209ENST00000533196 PIDD1Q9HB75 910 aa25.62■■□□□ 1.69
SMPD1-209ENST00000533196 GOLGA2P5Q9HBQ8 144 aa25.62■■□□□ 1.69
SMPD1-209ENST00000533196 IGSF9Q9P2J2 1179 aa25.62■■□□□ 1.69
SMPD1-209ENST00000533196 MTRRQ9UBK8 725 aa25.62■■□□□ 1.69
SMPD1-209ENST00000533196 SRPRBQ9Y5M8 271 aaKnown RBP25.62■■□□□ 1.69
SMPD1-209ENST00000533196 PODXLO00592 558 aa25.61■■□□□ 1.69
SMPD1-209ENST00000533196 TRAK2O60296 914 aa25.61■■□□□ 1.69
SMPD1-209ENST00000533196 PIGRP01833 764 aa25.61■■□□□ 1.69
SMPD1-209ENST00000533196 HOXA9P31269 272 aa25.61■■□□□ 1.69
SMPD1-209ENST00000533196 DHX8Q14562 1220 aaKnown RBP25.61■■□□□ 1.69
SMPD1-209ENST00000533196 LIN9Q5TKA1 542 aa25.61■■□□□ 1.69
SMPD1-209ENST00000533196 C3orf58Q8NDZ4 430 aa25.61■■□□□ 1.69
SMPD1-209ENST00000533196 BICD1Q96G01 975 aa25.61■■□□□ 1.69
SMPD1-209ENST00000533196 ZSCAN16Q9H4T2 348 aaPredicted RBP25.61■■□□□ 1.69
SMPD1-209ENST00000533196 STK17AQ9UEE5 414 aa25.61■■□□□ 1.69
SMPD1-209ENST00000533196 FBXO2Q9UK22 296 aaPredicted RBP25.61■■□□□ 1.69
SMPD1-209ENST00000533196 K7ENM7 598 aa25.6■■□□□ 1.69
SMPD1-209ENST00000533196 SYN3O14994 580 aa25.6■■□□□ 1.69
SMPD1-209ENST00000533196 TBCAO75347 108 aaKnown RBP25.6■■□□□ 1.69
SMPD1-209ENST00000533196 ASGR2P07307 311 aa25.6■■□□□ 1.69
SMPD1-209ENST00000533196 POU2F2P09086 479 aa25.6■■□□□ 1.69
SMPD1-209ENST00000533196 CLTAP09496 248 aa25.6■■□□□ 1.69
SMPD1-209ENST00000533196 MATR3P43243 847 aaKnown RBP eCLIP25.6■■□□□ 1.69
SMPD1-209ENST00000533196 UVSSAQ2YD98 709 aa25.6■■□□□ 1.69
SMPD1-209ENST00000533196 SLC10A6Q3KNW5 377 aa25.6■■□□□ 1.69
SMPD1-209ENST00000533196 TSPAN18Q96SJ8 248 aa25.6■■□□□ 1.69
SMPD1-209ENST00000533196 EPS15L1Q9UBC2 864 aa25.6■■□□□ 1.69
SMPD1-209ENST00000533196 TBX20Q9UMR3 447 aa25.6■■□□□ 1.69
SMPD1-209ENST00000533196 KMT2EQ8IZD2 1858 aa25.6■■□□□ 1.69
SMPD1-209ENST00000533196 TXLNAP40222 546 aa25.59■■□□□ 1.69
SMPD1-209ENST00000533196 LIG4P49917 911 aa25.59■■□□□ 1.69
SMPD1-209ENST00000533196 NXPE3Q969Y0 559 aa25.59■■□□□ 1.69
SMPD1-209ENST00000533196 EPSTI1Q96J88 318 aa25.59■■□□□ 1.69
SMPD1-209ENST00000533196 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.59■■□□□ 1.69
SMPD1-209ENST00000533196 MTMR6Q9Y217 621 aa25.59■■□□□ 1.69
SMPD1-209ENST00000533196 DOCK6Q96HP0 2047 aa25.59■■□□□ 1.69
SMPD1-209ENST00000533196 HNRNPDLO14979 420 aaKnown RBP25.58■■□□□ 1.69
SMPD1-209ENST00000533196 MYBP10242 640 aa25.58■■□□□ 1.69
SMPD1-209ENST00000533196 TKTP29401 623 aaKnown RBP25.58■■□□□ 1.69
SMPD1-209ENST00000533196 MARCKSP29966 332 aaPredicted RBP25.58■■□□□ 1.69
SMPD1-209ENST00000533196 GBP2P32456 591 aaPredicted RBP25.58■■□□□ 1.69
SMPD1-209ENST00000533196 OR1D2P34982 312 aa25.58■■□□□ 1.69
SMPD1-209ENST00000533196 BRCC3P46736 316 aa25.58■■□□□ 1.69
SMPD1-209ENST00000533196 GTF2BQ00403 316 aa25.58■■□□□ 1.69
SMPD1-209ENST00000533196 TDGQ13569 410 aa25.58■■□□□ 1.69
SMPD1-209ENST00000533196 PPM1LQ5SGD2 360 aa25.58■■□□□ 1.69
SMPD1-209ENST00000533196 KRI1Q8N9T8 703 aaKnown RBP25.58■■□□□ 1.69
SMPD1-209ENST00000533196 ST6GALNAC4Q9H4F1 302 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms