RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 MRPS23Q9Y3D9 190 aaKnown RBP16.69■□□□□ 0.26
BRPF3-210ENST00000532538 FANCMQ8IYD8 2048 aa16.69■□□□□ 0.26
BRPF3-210ENST00000532538 CACNA1IQ9P0X4 2223 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 PDCD11Q14690 1871 aaKnown RBP16.68■□□□□ 0.26
BRPF3-210ENST00000532538 PRRG1O14668 218 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 EDN1P05305 212 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 FGFR3P22607 806 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 HOXA9P31269 272 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 BRCC3P46736 316 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 HMGN5P82970 282 aaKnown RBP16.68■□□□□ 0.26
BRPF3-210ENST00000532538 FOXK2Q01167 660 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 DMP1Q13316 513 aaPredicted RBP16.68■□□□□ 0.26
BRPF3-210ENST00000532538 RAB33AQ14088 237 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 NBR1Q14596 966 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 NT5DC1Q5TFE4 455 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 C1orf210Q8IVY1 113 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 PJA1Q8NG27 643 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 MCRS1Q96EZ8 462 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 LLPHQ9BRT6 129 aaKnown RBP16.68■□□□□ 0.26
BRPF3-210ENST00000532538 BCO2Q9BYV7 579 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 SEMA4AQ9H3S1 761 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 KMT5AQ9NQR1 393 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 SPATA6Q9NWH7 488 aaPredicted RBP16.68■□□□□ 0.26
BRPF3-210ENST00000532538 DNM3Q9UQ16 869 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 STK24Q9Y6E0 443 aa16.68■□□□□ 0.26
BRPF3-210ENST00000532538 USP34Q70CQ2 3546 aa16.67■□□□□ 0.26
BRPF3-210ENST00000532538 MATR3P43243 847 aaKnown RBP eCLIP16.67■□□□□ 0.26
BRPF3-210ENST00000532538 PFKPQ01813 784 aa16.67■□□□□ 0.26
BRPF3-210ENST00000532538 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
BRPF3-210ENST00000532538 NAB2Q15742 525 aa16.67■□□□□ 0.26
BRPF3-210ENST00000532538 MLF2Q15773 248 aaPredicted RBP16.67■□□□□ 0.26
BRPF3-210ENST00000532538 ECM1Q16610 540 aa16.67■□□□□ 0.26
BRPF3-210ENST00000532538 SLC44A4Q53GD3 710 aa16.67■□□□□ 0.26
BRPF3-210ENST00000532538 KRT79Q5XKE5 535 aa16.67■□□□□ 0.26
BRPF3-210ENST00000532538 PPP1R10Q96QC0 940 aaKnown RBP16.67■□□□□ 0.26
BRPF3-210ENST00000532538 MRPL4Q9BYD3 311 aaKnown RBP16.67■□□□□ 0.26
BRPF3-210ENST00000532538 SLC38A7Q9NVC3 462 aa16.67■□□□□ 0.26
BRPF3-210ENST00000532538 DNMT3BQ9UBC3 853 aaKnown RBP16.67■□□□□ 0.26
BRPF3-210ENST00000532538 MTRRQ9UBK8 725 aa16.67■□□□□ 0.26
BRPF3-210ENST00000532538 PHLPP2Q6ZVD8 1323 aa16.67■□□□□ 0.26
BRPF3-210ENST00000532538 SMIM28A0A1B0GU29 152 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 KANSL1LA0AUZ9 987 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 E9PMD0 336 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 TMEM189-UBE2V1I3L0A0 370 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 LAMTOR5O43504 91 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 LRRN2O75325 713 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 PAPLNO95428 1278 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 TRAPPC10P48553 1259 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 FXR2P51116 673 aaKnown RBP eCLIP16.66■□□□□ 0.26
BRPF3-210ENST00000532538 UPP1Q16831 310 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 RIF1Q5UIP0 2472 aaKnown RBP16.66■□□□□ 0.26
BRPF3-210ENST00000532538 CEP120Q8N960 986 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 FBXO18Q8NFZ0 1043 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 DDX27Q96GQ7 796 aaKnown RBP16.66■□□□□ 0.26
BRPF3-210ENST00000532538 ZSCAN31Q96LW9 406 aaPredicted RBP16.66■□□□□ 0.26
BRPF3-210ENST00000532538 ACAP3Q96P50 834 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
BRPF3-210ENST00000532538 TNFSF13BQ9Y275 285 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 PATJQ8NI35 1801 aa16.66■□□□□ 0.26
BRPF3-210ENST00000532538 FAM170BA6NMN3 283 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 H7C4K7 107 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 PODXLO00592 558 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 HIP1RO75146 1068 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 RHOP08100 348 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 SP9P0CG40 484 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 PTPN2P17706 415 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 IGFBP6P24592 240 aaPredicted RBP16.65■□□□□ 0.26
BRPF3-210ENST00000532538 GRM5P41594 1212 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 NPTX2P47972 431 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 STARD6P59095 220 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 PRKCQQ04759 706 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 STRN3Q13033 797 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 PTGDRQ13258 359 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 KIAA2013Q8IYS2 634 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 ELMOD1Q8N336 334 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 DRC1Q96MC2 740 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 ACO2Q99798 780 aaKnown RBP16.65■□□□□ 0.26
BRPF3-210ENST00000532538 CORO1BQ9BR76 489 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 TARS2Q9BW92 718 aaKnown RBP16.65■□□□□ 0.26
BRPF3-210ENST00000532538 CDT1Q9H211 546 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 CYP4F11Q9HBI6 524 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 KCNH3Q9ULD8 1083 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 BACE2Q9Y5Z0 518 aa16.65■□□□□ 0.26
BRPF3-210ENST00000532538 KINO60870 393 aaKnown RBP16.64■□□□□ 0.25
BRPF3-210ENST00000532538 CD72P21854 359 aa16.64■□□□□ 0.25
BRPF3-210ENST00000532538 MCM4P33991 863 aa16.64■□□□□ 0.25
BRPF3-210ENST00000532538 RAD51AP2Q09MP3 1159 aa16.64■□□□□ 0.25
BRPF3-210ENST00000532538 PDIA5Q14554 519 aa16.64■□□□□ 0.25
BRPF3-210ENST00000532538 VARS2Q5ST30 1063 aaKnown RBP16.64■□□□□ 0.25
BRPF3-210ENST00000532538 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
BRPF3-210ENST00000532538 RSPO2Q6UXX9 243 aaPredicted RBP16.64■□□□□ 0.25
BRPF3-210ENST00000532538 NPAS3Q8IXF0 933 aa16.64■□□□□ 0.25
BRPF3-210ENST00000532538 ZNF461Q8TAF7 563 aa16.64■□□□□ 0.25
BRPF3-210ENST00000532538 TMEM134Q9H6X4 195 aa16.64■□□□□ 0.25
BRPF3-210ENST00000532538 ANKFY1Q9P2R3 1169 aa16.64■□□□□ 0.25
BRPF3-210ENST00000532538 RBM19Q9Y4C8 960 aaKnown RBP16.64■□□□□ 0.25
BRPF3-210ENST00000532538 COL4A3Q01955 1670 aa16.64■□□□□ 0.25
BRPF3-210ENST00000532538 SFI1A8K8P3 1242 aa16.63■□□□□ 0.25
BRPF3-210ENST00000532538 PP2D1A8MPX8 630 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms