RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 SPIRE2Q8WWL2 714 aa16.62■□□□□ 0.25
EXOSC4-203ENST00000527954 SNX27Q96L92 541 aa16.62■□□□□ 0.25
EXOSC4-203ENST00000527954 ZMAT2Q96NC0 199 aaKnown RBP16.62■□□□□ 0.25
EXOSC4-203ENST00000527954 ACAP3Q96P50 834 aa16.62■□□□□ 0.25
EXOSC4-203ENST00000527954 PHOX2BQ99453 314 aa16.62■□□□□ 0.25
EXOSC4-203ENST00000527954 IGSF9Q9P2J2 1179 aa16.62■□□□□ 0.25
EXOSC4-203ENST00000527954 TRAPPC3O43617 180 aa16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 NARSO43776 548 aaKnown RBP16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 MAPTP10636 758 aaKnown RBP16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 TKTP29401 623 aaKnown RBP16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 DHX8Q14562 1220 aaKnown RBP16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 ARSHQ5FYA8 562 aa16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 PPM1LQ5SGD2 360 aa16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 RSPO2Q6UXX9 243 aaPredicted RBP16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 GET4Q7L5D6 327 aaPredicted RBP16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 MFSD1Q9H3U5 465 aa16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 ANKFY1Q9P2R3 1169 aa16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 EPS15L1Q9UBC2 864 aa16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 MTRRQ9UBK8 725 aa16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 DUSP12Q9UNI6 340 aa16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 KMT2EQ8IZD2 1858 aa16.61■□□□□ 0.25
EXOSC4-203ENST00000527954 MEFVO15553 781 aaPredicted RBP16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 TOM1L1O75674 476 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 C8AP07357 584 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 HNRNPA1P09651 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 KCNE1P15382 129 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 UBA7P41226 1012 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 NTHL1P78549 312 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 GRIN1Q05586 938 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 RAB33AQ14088 237 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 GRASPQ7Z6J2 395 aaPredicted RBP16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 TMEM105Q8N8V8 129 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 FLCNQ8NFG4 579 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 ST13P5Q8NFI4 369 aaPredicted RBP16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 LRRC15Q8TF66 581 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 C18orf25Q96B23 403 aaPredicted RBP16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 CALML4Q96GE6 196 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 DDX27Q96GQ7 796 aaKnown RBP16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 AK8Q96MA6 479 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 SLC38A7Q9NVC3 462 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 KCND2Q9NZV8 630 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 KCNG1Q9UIX4 513 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 CDY1Q9Y6F8 540 aa16.6■□□□□ 0.25
EXOSC4-203ENST00000527954 MYO10Q9HD67 2058 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 VPS37CA5D8V6 355 aaPredicted RBP16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 PODXLO00592 558 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 CCL16O15467 120 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 LAMP2P13473 410 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 FSHRP23945 695 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 NOLC1Q14978 699 aaKnown RBP eCLIP16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 SF3A1Q15459 793 aaKnown RBP16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 AXDND1Q5T1B0 1012 aaPredicted RBP16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 ASTLQ6HA08 431 aaPredicted RBP16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 ZPBP2Q6X784 338 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 BRAPQ7Z569 592 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 GPBP1Q86WP2 473 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 SLC44A3Q8N4M1 653 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 SLC7A14Q8TBB6 771 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 BLOC1S4Q9NUP1 217 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 FAM86C1Q9NVL1 165 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 CNTN3Q9P232 1028 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 LARSQ9P2J5 1176 aaKnown RBP16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 FBXL21Q9UKT6 434 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 POLIQ9UNA4 740 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 BACE2Q9Y5Z0 518 aa16.59■□□□□ 0.25
EXOSC4-203ENST00000527954 CLDN3O15551 220 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 SLC26A4O43511 780 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 BMP15O95972 392 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 CFHP08603 1231 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 MATR3P43243 847 aaKnown RBP eCLIP16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 NCKAP1LP55160 1127 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 CUL4AQ13619 759 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 KARSQ15046 597 aaKnown RBP16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 SLC10A6Q3KNW5 377 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 ANKS3Q6ZW76 656 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 HAUS6Q7Z4H7 955 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 BICD1Q96G01 975 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 REEP2Q9BRK0 252 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 HAPLN2Q9GZV7 340 aa16.58■□□□□ 0.24
EXOSC4-203ENST00000527954 H0Y858 1186 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 GALR2O43603 387 aaPredicted RBP16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 XYLBO75191 536 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 NPR3P17342 541 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 PLCG1P19174 1290 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 HOXA9P31269 272 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 RPL9P32969 192 aaKnown RBP16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 LONP1P36776 959 aaKnown RBP16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 NUBP1P53384 320 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 MCL1Q07820 350 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 MCM6Q14566 821 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 UVSSAQ2YD98 709 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 VARS2Q5ST30 1063 aaKnown RBP16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 CWF19L1Q69YN2 538 aaKnown RBP16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 SIX5Q8N196 739 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 TMEM130Q8N3G9 435 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 MYCT1Q8N699 235 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 RASSF8Q8NHQ8 419 aa16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 ATOH1Q92858 354 aaPredicted RBP16.57■□□□□ 0.24
EXOSC4-203ENST00000527954 HCFC1R1Q9NWW0 138 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms