RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 MCF2P10911 925 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 FGFR3P22607 806 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
SSBP3-210ENST00000525990 GBP2P32456 591 aaPredicted RBP13.2□□□□□ -0.3
SSBP3-210ENST00000525990 OR1D2P34982 312 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 TNFSF9P41273 254 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 NCKAP1LP55160 1127 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 RESTQ13127 1097 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 PTPAQ15257 358 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 ZBTB41Q5SVQ8 909 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 BRAPQ7Z569 592 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 SUGP1Q8IWZ8 645 aaKnown RBP13.2□□□□□ -0.3
SSBP3-210ENST00000525990 EPSTI1Q96J88 318 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 AK8Q96MA6 479 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 BACH2Q9BYV9 841 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 IKZF4Q9H2S9 585 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 C17orf75Q9HAS0 396 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 WDR6Q9NNW5 1121 aaKnown RBP13.2□□□□□ -0.3
SSBP3-210ENST00000525990 TUBGCP4Q9UGJ1 667 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 FBXW11Q9UKB1 542 aa13.2□□□□□ -0.3
SSBP3-210ENST00000525990 RBM19Q9Y4C8 960 aaKnown RBP13.2□□□□□ -0.3
SSBP3-210ENST00000525990 ZMYND10O75800 440 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 CXCL8P10145 99 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 SYT1P21579 422 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 MARCKSP29966 332 aaPredicted RBP13.19□□□□□ -0.3
SSBP3-210ENST00000525990 UBA7P41226 1012 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 YARSP54577 528 aaKnown RBP13.19□□□□□ -0.3
SSBP3-210ENST00000525990 CEBPZQ03701 1054 aaKnown RBP13.19□□□□□ -0.3
SSBP3-210ENST00000525990 STRN3Q13033 797 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 NOLC1Q14978 699 aaKnown RBP eCLIP13.19□□□□□ -0.3
SSBP3-210ENST00000525990 SLC10A6Q3KNW5 377 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 DCLRE1AQ6PJP8 1040 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.19□□□□□ -0.3
SSBP3-210ENST00000525990 GET4Q7L5D6 327 aaPredicted RBP13.19□□□□□ -0.3
SSBP3-210ENST00000525990 OTOP3Q7RTS5 596 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 HAUS6Q7Z4H7 955 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 GRASPQ7Z6J2 395 aaPredicted RBP13.19□□□□□ -0.3
SSBP3-210ENST00000525990 ALYREFQ86V81 257 aaKnown RBP13.19□□□□□ -0.3
SSBP3-210ENST00000525990 GPR65Q8IYL9 337 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 RAD54LQ92698 747 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 ACSF2Q96CM8 615 aaPredicted RBP13.19□□□□□ -0.3
SSBP3-210ENST00000525990 CLIC6Q96NY7 704 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 ACAP3Q96P50 834 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 TIPINQ9BVW5 301 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 PRKD2Q9BZL6 878 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 PLEKHA4Q9H4M7 779 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 KCNK12Q9HB15 430 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 PIDD1Q9HB75 910 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 HCFC1R1Q9NWW0 138 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 MTRRQ9UBK8 725 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
SSBP3-210ENST00000525990 SCN1AP35498 2009 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 TISP43B9A030 160 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 PODXLO00592 558 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 CCL16O15467 120 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 TOM1L1O75674 476 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 PAPLNO95428 1278 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 C8AP07357 584 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 AVPR2P30518 371 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 GUCY2FP51841 1108 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 SMTNP53814 917 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 CREMQ03060 361 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 MCL1Q07820 350 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 TCF15Q12870 199 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 SLC39A4Q6P5W5 647 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 APBB1IPQ7Z5R6 666 aaPredicted RBP13.18□□□□□ -0.3
SSBP3-210ENST00000525990 UBALD2Q8IYN6 164 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 TMEM105Q8N8V8 129 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 SLC7A14Q8TBB6 771 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 HDAC7Q8WUI4 952 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 CALML4Q96GE6 196 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 FIZ1Q96SL8 496 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 TOPORSQ9NS56 1045 aaPredicted RBP13.18□□□□□ -0.3
SSBP3-210ENST00000525990 FAM86C1Q9NVL1 165 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 ZDHHC7Q9NXF8 308 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 KCND2Q9NZV8 630 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 FBXO2Q9UK22 296 aaPredicted RBP13.18□□□□□ -0.3
SSBP3-210ENST00000525990 ODF2LQ9ULJ1 636 aa13.18□□□□□ -0.3
SSBP3-210ENST00000525990 K7ENM7 598 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 FAM189A1O60320 539 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 FAM13AO94988 1023 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 KCNE1P15382 129 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 NMT1P30419 496 aaKnown RBP13.17□□□□□ -0.3
SSBP3-210ENST00000525990 LONP1P36776 959 aaKnown RBP13.17□□□□□ -0.3
SSBP3-210ENST00000525990 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.33e-6■■■□□ 14.6
SSBP3-210ENST00000525990 ZNF131P52739 623 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 ELAVL2Q12926 359 aaKnown RBP13.17□□□□□ -0.3
SSBP3-210ENST00000525990 ZC2HC1CQ53FD0 456 aaPredicted RBP13.17□□□□□ -0.3
SSBP3-210ENST00000525990 AXDND1Q5T1B0 1012 aaPredicted RBP13.17□□□□□ -0.3
SSBP3-210ENST00000525990 ZPBP2Q6X784 338 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 MYCT1Q8N699 235 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 LARP4BQ92615 738 aaKnown RBP13.17□□□□□ -0.3
SSBP3-210ENST00000525990 BICD1Q96G01 975 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 UROC1Q96N76 676 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 RHOBTB2Q9BYZ6 727 aa13.17□□□□□ -0.3
SSBP3-210ENST00000525990 LARSQ9P2J5 1176 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms