RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 CALML4Q96GE6 196 aa10.35□□□□□ -0.75
SF3B2-204ENST00000525207 CLSTN3Q9BQT9 956 aa10.35□□□□□ -0.75
SF3B2-204ENST00000525207 REEP2Q9BRK0 252 aa10.35□□□□□ -0.75
SF3B2-204ENST00000525207 SMOC2Q9H3U7 446 aa10.35□□□□□ -0.75
SF3B2-204ENST00000525207 WDR6Q9NNW5 1121 aaKnown RBP10.35□□□□□ -0.75
SF3B2-204ENST00000525207 BLOC1S4Q9NUP1 217 aa10.35□□□□□ -0.75
SF3B2-204ENST00000525207 SLC38A7Q9NVC3 462 aa10.35□□□□□ -0.75
SF3B2-204ENST00000525207 CNTN3Q9P232 1028 aa10.35□□□□□ -0.75
SF3B2-204ENST00000525207 LARSQ9P2J5 1176 aaKnown RBP10.35□□□□□ -0.75
SF3B2-204ENST00000525207 MTRRQ9UBK8 725 aa10.35□□□□□ -0.75
SF3B2-204ENST00000525207 WDFY4Q6ZS81 3184 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 NPHP3-ACAD11A0A0J9YXS1 232 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 SMIM28A0A1B0GU29 152 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 H0YCG3 227 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 MEFVO15553 781 aaPredicted RBP10.34□□□□□ -0.75
SF3B2-204ENST00000525207 TOM1L1O75674 476 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 ZMYND10O75800 440 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 SPATA31D3P0C874 917 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 MYBP10242 640 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 HARSP12081 509 aaKnown RBP10.34□□□□□ -0.75
SF3B2-204ENST00000525207 FGFR3P22607 806 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 LONP1P36776 959 aaKnown RBP10.34□□□□□ -0.75
SF3B2-204ENST00000525207 UBA7P41226 1012 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 ZNF131P52739 623 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 SMTNP53814 917 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 VCPP55072 806 aaKnown RBP10.34□□□□□ -0.75
SF3B2-204ENST00000525207 MCL1Q07820 350 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 STRN3Q13033 797 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 KARSQ15046 597 aaKnown RBP10.34□□□□□ -0.75
SF3B2-204ENST00000525207 SF3A1Q15459 793 aaKnown RBP10.34□□□□□ -0.75
SF3B2-204ENST00000525207 ARSHQ5FYA8 562 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 PDXDC1Q6P996 788 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 CD300LGQ6UXG3 332 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 ZPBP2Q6X784 338 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 SPATA31D4Q6ZUB0 917 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 GPBP1Q86WP2 473 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 CEP57Q86XR8 500 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 STAMQ92783 540 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 DDX27Q96GQ7 796 aaKnown RBP10.34□□□□□ -0.75
SF3B2-204ENST00000525207 ZMAT2Q96NC0 199 aaKnown RBP10.34□□□□□ -0.75
SF3B2-204ENST00000525207 PRKD2Q9BZL6 878 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 LIMD1Q9UGP4 676 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 KCNG1Q9UIX4 513 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 NOTCH4Q99466 2003 aa10.34□□□□□ -0.75
SF3B2-204ENST00000525207 K7ENM7 598 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 PODXLO00592 558 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 ADAM12O43184 909 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 PDGFBP01127 241 aaPredicted RBP10.33□□□□□ -0.76
SF3B2-204ENST00000525207 C8AP07357 584 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 KCNE1P15382 129 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 IGFBP6P24592 240 aaPredicted RBP10.33□□□□□ -0.76
SF3B2-204ENST00000525207 TKTP29401 623 aaKnown RBP10.33□□□□□ -0.76
SF3B2-204ENST00000525207 HOXA9P31269 272 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 BRCC3P46736 316 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 NHLH1Q02575 133 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 RESTQ13127 1097 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 PTPAQ15257 358 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 LIN9Q5TKA1 542 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 POTEHQ6S545 545 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 GET4Q7L5D6 327 aaPredicted RBP10.33□□□□□ -0.76
SF3B2-204ENST00000525207 PRSS33Q8NF86 280 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 RASSF8Q8NHQ8 419 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 LARP4BQ92615 738 aaKnown RBP10.33□□□□□ -0.76
SF3B2-204ENST00000525207 RAD54LQ92698 747 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 ZBTB45Q96K62 511 aaPredicted RBP10.33□□□□□ -0.76
SF3B2-204ENST00000525207 ACAP3Q96P50 834 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 TCHPQ9BT92 498 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 BACH2Q9BYV9 841 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 CCSER1Q9C0I3 900 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 EPS15L1Q9UBC2 864 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 DUSP12Q9UNI6 340 aa10.33□□□□□ -0.76
SF3B2-204ENST00000525207 I3L4J1 428 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 HNRNPDLO14979 420 aaKnown RBP10.32□□□□□ -0.76
SF3B2-204ENST00000525207 CLDN3O15551 220 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 TRAPPC3O43617 180 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 FAM13AO94988 1023 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 PIGRP01833 764 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 POU2F2P09086 479 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 HNRNPA1P09651 372 aaKnown RBP eCLIP10.32□□□□□ -0.76
SF3B2-204ENST00000525207 CXCL8P10145 99 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 SYT1P21579 422 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 SCP2P22307 547 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 GBP2P32456 591 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-204ENST00000525207 RAB33AQ14088 237 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 MCM6Q14566 821 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 SLC10A6Q3KNW5 377 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 DCLRE1AQ6PJP8 1040 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 ANKS3Q6ZW76 656 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 HAUS6Q7Z4H7 955 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 SLC7A14Q8TBB6 771 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 C18orf25Q96B23 403 aaPredicted RBP10.32□□□□□ -0.76
SF3B2-204ENST00000525207 BICD1Q96G01 975 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 INTS4Q96HW7 963 aaKnown RBP10.32□□□□□ -0.76
SF3B2-204ENST00000525207 MYADMQ96S97 322 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 FIZ1Q96SL8 496 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 HAPLN2Q9GZV7 340 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 KCNK12Q9HB15 430 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 PIDD1Q9HB75 910 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 PARVGQ9HBI0 331 aa10.32□□□□□ -0.76
SF3B2-204ENST00000525207 IGSF9Q9P2J2 1179 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms