RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 PARNO95453 639 aaKnown RBP3.96□□□□□ -1.78
CSDE1-209ENST00000525132 GLP2RO95838 553 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 CD4P01730 458 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 A1BGP04217 495 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 GSNP06396 782 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 RDXP35241 583 aaKnown RBP3.96□□□□□ -1.78
CSDE1-209ENST00000525132 ACLYP53396 1101 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 RHDQ02161 417 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 RAB33AQ14088 237 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 NCAPHQ15003 741 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 TESK1Q15569 626 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 IGFBP7Q16270 282 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 DDR2Q16832 855 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 GNPTABQ3T906 1256 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 CCDC181Q5TID7 509 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 SPNS3Q6ZMD2 512 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 FASTKD5Q7L8L6 764 aaKnown RBP3.96□□□□□ -1.78
CSDE1-209ENST00000525132 SLCO6A1Q86UG4 719 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 NLRX1Q86UT6 975 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 FIBCD1Q8N539 461 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 EDC3Q96F86 508 aaKnown RBP3.96□□□□□ -1.78
CSDE1-209ENST00000525132 PRMT6Q96LA8 375 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-209ENST00000525132 SLC45A1Q9Y2W3 748 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 SUGT1Q9Y2Z0 365 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 EMC9Q9Y3B6 208 aa3.96□□□□□ -1.78
CSDE1-209ENST00000525132 SERINC4A6NH21 518 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 NARSO43776 548 aaKnown RBP3.95□□□□□ -1.78
CSDE1-209ENST00000525132 NRDCO43847 1150 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 TP53P04637 393 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-209ENST00000525132 PFKMP08237 780 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 SYPP08247 313 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 KIR2DL1P43626 348 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-209ENST00000525132 KIR2DL2P43627 348 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-209ENST00000525132 PCBP3P57721 371 aaKnown RBP3.95□□□□□ -1.78
CSDE1-209ENST00000525132 PURAQ00577 322 aaKnown RBP3.95□□□□□ -1.78
CSDE1-209ENST00000525132 SRSF5Q13243 272 aaKnown RBP3.95□□□□□ -1.78
CSDE1-209ENST00000525132 HLFQ16534 295 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 SLC10A6Q3KNW5 377 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 PLEKHG4Q58EX7 1191 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 HSP90AB2PQ58FF8 381 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 TCEAL6Q6IPX3 200 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 RCSD1Q6JBY9 416 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 LBX2Q6XYB7 198 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 LINC01465Q8N7H1 131 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 ANKS4BQ8N8V4 417 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 NUP133Q8WUM0 1156 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 CPLX3Q8WVH0 158 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 COPS5Q92905 334 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 BRF1Q92994 677 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 TCEAL3Q969E4 200 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 C1orf159Q96HA4 380 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 CCDC120Q96HB5 630 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 DEPDC7Q96QD5 511 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 TMEM39BQ9GZU3 492 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 NYXQ9GZU5 481 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 CSRNP2Q9H175 543 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 SLKQ9H2G2 1235 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-209ENST00000525132 XPNPEP3Q9NQH7 507 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 DIS3Q9Y2L1 958 aaKnown RBP3.95□□□□□ -1.78
CSDE1-209ENST00000525132 R3HCC1Q9Y3T6 440 aaKnown RBP3.95□□□□□ -1.78
CSDE1-209ENST00000525132 ATG2AQ2TAZ0 1938 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 IL16Q14005 1332 aa3.95□□□□□ -1.78
CSDE1-209ENST00000525132 MUC22E2RYF6 1773 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-209ENST00000525132 GREB1Q4ZG55 1949 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 PSME4Q14997 1843 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 ST20-MTHFSA0A0A6YYL1 179 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 TMEM200CA6NKL6 621 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 ARNTLO00327 626 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 CXCL11O14625 94 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 AURKAO14965 403 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 SUSD5O60279 629 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 GJB6O95452 261 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 HSP90AB1P08238 724 aaKnown RBP3.94□□□□□ -1.78
CSDE1-209ENST00000525132 ITGA4P13612 1032 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 IFNGR1P15260 489 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 CD72P21854 359 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 PIP4K2AP48426 406 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-209ENST00000525132 MTHFSP49914 203 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 DEFB103AP81534 67 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 RBM10P98175 930 aaKnown RBP3.94□□□□□ -1.78
CSDE1-209ENST00000525132 CLEC16AQ2KHT3 1053 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 LRP10Q7Z4F1 713 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 ZSWIM9Q86XI8 627 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 CILP2Q8IUL8 1156 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 TRIM59Q8IWR1 403 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 EFHBQ8N7U6 833 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 PJA1Q8NG27 643 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 TDRD7Q8NHU6 1098 aaKnown RBP3.94□□□□□ -1.78
CSDE1-209ENST00000525132 PLCD4Q9BRC7 762 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 EDEM2Q9BV94 578 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 APOL5Q9BWW9 433 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 ASCC2Q9H1I8 757 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-209ENST00000525132 SNTG2Q9NY99 539 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 CHPF2Q9P2E5 772 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 WNT16Q9UBV4 365 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 CDH22Q9UJ99 828 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 DUSP12Q9UNI6 340 aa3.94□□□□□ -1.78
CSDE1-209ENST00000525132 LOC102724159A0A0B4J2E5 919 aa3.93□□□□□ -1.78
CSDE1-209ENST00000525132 A0A0G2JLL6 359 aaPredicted RBP3.93□□□□□ -1.78
CSDE1-209ENST00000525132 FITM1A5D6W6 292 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms