RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 OR6B3Q8NGW1 331 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 CYP2W1Q8TAV3 490 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 PLEKHO2Q8TD55 490 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 EDARADDQ8WWZ3 215 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 ST8SIA4Q92187 359 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 NMD3Q96D46 503 aaKnown RBP6.14□□□□□ -1.43
USP47-204ENST00000525078 SAMD11Q96NU1 681 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 P2RX7Q99572 595 aaKnown RBP6.14□□□□□ -1.43
USP47-204ENST00000525078 MAGEB5Q9BZ81 275 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 MTG2Q9H4K7 406 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.14□□□□□ -1.43
USP47-204ENST00000525078 TBC1D23Q9NUY8 699 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.14□□□□□ -1.43
USP47-204ENST00000525078 HERC5Q9UII4 1024 aaKnown RBP6.14□□□□□ -1.43
USP47-204ENST00000525078 DENND2AQ9ULE3 1009 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 SCAF8Q9UPN6 1271 aaKnown RBP6.14□□□□□ -1.43
USP47-204ENST00000525078 TELO2Q9Y4R8 837 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 PCDHB6Q9Y5E3 794 aa6.14□□□□□ -1.43
USP47-204ENST00000525078 A0A0A0MRY4 1105 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.13□□□□□ -1.43
USP47-204ENST00000525078 ASNA1O43681 348 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 PPP1R11O60927 126 aaPredicted RBP6.13□□□□□ -1.43
USP47-204ENST00000525078 ITGA5P08648 1049 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 JUPP14923 745 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 RXRAP19793 462 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 CHMP24386 653 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 AARSP49588 968 aaKnown RBP eCLIP6.13□□□□□ -1.43
USP47-204ENST00000525078 RGS3P49796 1198 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 CALD1Q05682 793 aaKnown RBP6.13□□□□□ -1.43
USP47-204ENST00000525078 PPP3CAQ08209 521 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 CUL4BQ13620 913 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 ERV3-1Q14264 604 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 TSTQ16762 297 aaKnown RBP6.13□□□□□ -1.43
USP47-204ENST00000525078 SLC44A4Q53GD3 710 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 ARHGAP15Q53QZ3 475 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 SGO2Q562F6 1265 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 ZMYM1Q5SVZ6 1142 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 HECTD3Q5T447 861 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 CDKAL1Q5VV42 579 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 ACAD10Q6JQN1 1059 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 C22orf34Q6ZV56 151 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 GAREM2Q75VX8 874 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 KANSL1Q7Z3B3 1105 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 CHD1LQ86WJ1 897 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 VSIG1Q86XK7 387 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 HSCBQ8IWL3 235 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 FLCNQ8NFG4 579 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 ATP2A3Q93084 1043 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 BTBD6Q96KE9 485 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 SPATA17Q96L03 361 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 MRGPRX1Q96LB2 322 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 FOXB1Q99853 325 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 NOL10Q9BSC4 688 aaKnown RBP6.13□□□□□ -1.43
USP47-204ENST00000525078 TAF1DQ9H5J8 278 aaPredicted RBP6.13□□□□□ -1.43
USP47-204ENST00000525078 WDCPQ9H6R7 721 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 MLXIPQ9HAP2 919 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 ERVK13-1Q9NX77 482 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.13□□□□□ -1.43
USP47-204ENST00000525078 MYOTQ9UBF9 498 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 ZC3H7BQ9UGR2 993 aaKnown RBP6.13□□□□□ -1.43
USP47-204ENST00000525078 SCOCQ9UIL1 159 aa6.13□□□□□ -1.43
USP47-204ENST00000525078 RSF1Q96T23 1441 aaPredicted RBP6.13□□□□□ -1.43
USP47-204ENST00000525078 TRIM64A6NGJ6 449 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 TRIM64BA6NI03 449 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 WASH4PA8MWX3 477 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 FCHO1O14526 889 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 AP3D1O14617 1153 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 HGSO14964 777 aaPredicted RBP6.12□□□□□ -1.43
USP47-204ENST00000525078 NRP2O60462 931 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 FAM155BO75949 473 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 URI1O94763 535 aaPredicted RBP6.12□□□□□ -1.43
USP47-204ENST00000525078 CELA2BP08218 269 aaPredicted RBP6.12□□□□□ -1.43
USP47-204ENST00000525078 IDEP14735 1019 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 CST5P28325 142 aaPredicted RBP6.12□□□□□ -1.43
USP47-204ENST00000525078 MC4RP32245 332 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 KCNJ5P48544 419 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 GPR15P49685 360 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 NRG3P56975 720 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 SRSF11Q05519 484 aaKnown RBP6.12□□□□□ -1.43
USP47-204ENST00000525078 GRIN1Q05586 938 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 WASHC5Q12768 1159 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 CDC16Q13042 620 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 NOLC1Q14978 699 aaKnown RBP eCLIP6.12□□□□□ -1.43
USP47-204ENST00000525078 KIAA1614Q5VZ46 1190 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 ZNF783Q6ZMS7 281 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 UNC13DQ70J99 1090 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 GLB1L2Q8IW92 636 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 TRIM48Q8IWZ4 208 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 GLIS1Q8NBF1 620 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 KBTBD7Q8WVZ9 684 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 THAP4Q8WY91 577 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 EID2BQ96D98 161 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 TMX3Q96JJ7 454 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 AGXT2Q9BYV1 514 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 CEP41Q9BYV8 373 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 GPR63Q9BZJ6 419 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 MANSC1Q9H8J5 431 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 CD248Q9HCU0 757 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 NECTIN3Q9NQS3 549 aa6.12□□□□□ -1.43
USP47-204ENST00000525078 PLSCR4Q9NRQ2 329 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms