RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 KIF12Q96FN5 646 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 MRFAP1L1Q96HT8 127 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 ANKRD36BP1Q96IX9 119 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 ELAC1Q9H777 363 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 INTS13Q9NVM9 706 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 LRFN2Q9ULH4 789 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 DERAQ9Y315 318 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 C2CD2Q9Y426 696 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 ANK1P16157 1881 aa17.14■□□□□ 0.33
TSPAN4-213ENST00000524895 CITO14578 2027 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 ABHD14A-ACY1A0A1B0GW23 586 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 TEX33O43247 280 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 GLRA4Q5JXX5 417 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 GLB1LQ6UWU2 654 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 ALKAL1Q6UXT8 129 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 OR5B17Q8NGF7 314 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 CACTINQ8WUQ7 758 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 FAM84AQ96KN4 292 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 ZFP42Q96MM3 310 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 TSPAN18Q96SJ8 248 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 GAD1Q99259 594 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 LBHD1Q9BQE6 289 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 MTMR12Q9C0I1 747 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 TMEM117Q9H0C3 514 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 PCDHB7Q9Y5E2 793 aa17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 MKI67P46013 3256 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-213ENST00000524895 TET1Q8NFU7 2136 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 GTPBP10A4D1E9 387 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 ARL5CA6NH57 179 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 P4HA2O15460 535 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 XPOTO43592 962 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 PHACTR2O75167 634 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 BAIAP3O94812 1187 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 AMHP03971 560 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 KCNE1P15382 129 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 XKR4Q5GH76 650 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 TDRD10Q5VZ19 366 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 PSRC1Q6PGN9 363 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 GBP6Q6ZN66 633 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 SV2AQ7L0J3 742 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 NPAS4Q8IUM7 802 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 ZNF516Q92618 1163 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 PCMTD1Q96MG8 357 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 CXCL16Q9H2A7 254 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 GCNT4Q9P109 453 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 INPP5FQ9Y2H2 1132 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 NR2E3Q9Y5X4 410 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 MICAL3Q7RTP6 2002 aa17.12■□□□□ 0.33
TSPAN4-213ENST00000524895 SMIM28A0A1B0GU29 152 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 A0A1W2PQC6 194 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 PTGESO14684 152 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 HOXA2O43364 376 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 PIK3CAP42336 1068 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 KCNJ6P48051 423 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 SCNN1GP51170 649 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 SYCP1Q15431 976 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 PTPN21Q16825 1174 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 EXOC3L4Q17RC7 722 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 ZACNQ401N2 412 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 C15orf39Q6ZRI6 1047 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 TRAPPC11Q7Z392 1133 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 ABI1Q8IZP0 508 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 FBXL13Q8NEE6 735 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 BEST2Q8NFU1 509 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 URGCPQ8TCY9 931 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 HELQQ8TDG4 1101 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 ZMAT2Q96NC0 199 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 ERGIC2Q96RQ1 377 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 CRACR2AQ9BSW2 395 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 RNF19AQ9NV58 838 aa17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 UBQLN1Q9UMX0 589 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-213ENST00000524895 ZBBXA8MT70 800 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 PMM2O15305 246 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 CLSTN1O94985 981 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 FGBP02675 491 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 C4BPAP04003 597 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 THP07101 528 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 FGFR1P11362 822 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 WDR5P61964 334 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 CLLU1OSQ5K130 101 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 OTOP2Q7RTS6 562 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 VSTM4Q8IW00 320 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 TAS1R2Q8TE23 839 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 C18orf25Q96B23 403 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 PPP1R10Q96QC0 940 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 SLC38A7Q9NVC3 462 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 DPP3Q9NY33 737 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 TUBGCP4Q9UGJ1 667 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 R3HCC1Q9Y3T6 440 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 PDCD11Q14690 1871 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-213ENST00000524895 OFD1O75665 1012 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 POMCP01189 267 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 HLA-DRAP01903 254 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 ITGB3P05106 788 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 KRT19P08727 400 aa17.09■□□□□ 0.33
TSPAN4-213ENST00000524895 CDC25BP30305 580 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms