RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 KCNN1Q92952 543 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 ACSF2Q96CM8 615 aaPredicted RBP17.75■□□□□ 0.43
CLN8-206ENST00000523237 DDX27Q96GQ7 796 aaKnown RBP17.75■□□□□ 0.43
CLN8-206ENST00000523237 EPSTI1Q96J88 318 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 MFSD14AQ96MC6 490 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 RHOBTB2Q9BYZ6 727 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 PARVGQ9HBI0 331 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 GOLGA2P5Q9HBQ8 144 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 CNTN3Q9P232 1028 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 CCDC39Q9UFE4 941 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 FBXO2Q9UK22 296 aaPredicted RBP17.75■□□□□ 0.43
CLN8-206ENST00000523237 MTMR6Q9Y217 621 aa17.75■□□□□ 0.43
CLN8-206ENST00000523237 SRPRBQ9Y5M8 271 aaKnown RBP17.75■□□□□ 0.43
CLN8-206ENST00000523237 TMEM221A6NGB7 291 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 K7ENM7 598 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 M0R296 226 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 STX6O43752 255 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 TBCAO75347 108 aaKnown RBP17.74■□□□□ 0.43
CLN8-206ENST00000523237 MYBP10242 640 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 KCNE1P15382 129 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 DDIT3P35638 169 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 TXLNAP40222 546 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 CEBPZQ03701 1054 aaKnown RBP17.74■□□□□ 0.43
CLN8-206ENST00000523237 SOX4Q06945 474 aaPredicted RBP17.74■□□□□ 0.43
CLN8-206ENST00000523237 MCL1Q07820 350 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 SPECC1Q5M775 1068 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 LILRA6Q6PI73 481 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 OTOP3Q7RTS5 596 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 ZMAT2Q96NC0 199 aaKnown RBP17.74■□□□□ 0.43
CLN8-206ENST00000523237 CLSTN3Q9BQT9 956 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 ZHX3Q9H4I2 956 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 ZDHHC7Q9NXF8 308 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 STK17AQ9UEE5 414 aa17.74■□□□□ 0.43
CLN8-206ENST00000523237 TRAK2O60296 914 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 RFPL2O75678 378 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 FGFR3P22607 806 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 ABCD1P33897 745 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 LIG4P49917 911 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 MTMR3Q13615 1198 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 USP49Q70CQ1 688 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 BMP8AQ7Z5Y6 402 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 KREMEN2Q8NCW0 462 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 SMG7Q92540 1137 aaKnown RBP17.73■□□□□ 0.43
CLN8-206ENST00000523237 SNX21Q969T3 373 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 TBX20Q9UMR3 447 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 SORCS3Q9UPU3 1222 aa17.73■□□□□ 0.43
CLN8-206ENST00000523237 PODXLO00592 558 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 HNRNPDLO14979 420 aaKnown RBP17.72■□□□□ 0.43
CLN8-206ENST00000523237 PAPLNO95428 1278 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 KYAT1Q16773 422 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 SEZ6Q53EL9 994 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 CD300LGQ6UXG3 332 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 UBALD2Q8IYN6 164 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 KRI1Q8N9T8 703 aaKnown RBP17.72■□□□□ 0.43
CLN8-206ENST00000523237 C3orf58Q8NDZ4 430 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 STAMQ92783 540 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 PBXIP1Q96AQ6 731 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 CLIC6Q96NY7 704 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 USP28Q96RU2 1077 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 PLEKHA5Q9HAU0 1116 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 PIDD1Q9HB75 910 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 WDR6Q9NNW5 1121 aaKnown RBP17.72■□□□□ 0.43
CLN8-206ENST00000523237 LIMD1Q9UGP4 676 aa17.72■□□□□ 0.43
CLN8-206ENST00000523237 MORC2Q9Y6X9 1032 aaPredicted RBP17.72■□□□□ 0.43
CLN8-206ENST00000523237 ZMYND10O75800 440 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 PIGRP01833 764 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 CLTAP09496 248 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 RPL9P32969 192 aaKnown RBP17.71■□□□□ 0.43
CLN8-206ENST00000523237 PLA2G5P39877 138 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 SLC39A14Q15043 492 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 SLC10A6Q3KNW5 377 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 LIN9Q5TKA1 542 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 RRAGBQ5VZM2 374 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 ANKS3Q6ZW76 656 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 HSCBQ8IWL3 235 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 C18orf25Q96B23 403 aaPredicted RBP17.71■□□□□ 0.43
CLN8-206ENST00000523237 ZNF707Q96C28 371 aaPredicted RBP17.71■□□□□ 0.43
CLN8-206ENST00000523237 FAM122AQ96E09 287 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 PRKD2Q9BZL6 878 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 MTRRQ9UBK8 725 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 FBXW11Q9UKB1 542 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 NUB1Q9Y5A7 615 aa17.71■□□□□ 0.43
CLN8-206ENST00000523237 CLUHO75153 1309 aa17.71■□□□□ 0.42
CLN8-206ENST00000523237 MEFVO15553 781 aaPredicted RBP17.7■□□□□ 0.42
CLN8-206ENST00000523237 CXCL8P10145 99 aa17.7■□□□□ 0.42
CLN8-206ENST00000523237 IGFBP6P24592 240 aaPredicted RBP17.7■□□□□ 0.42
CLN8-206ENST00000523237 TKTP29401 623 aaKnown RBP17.7■□□□□ 0.42
CLN8-206ENST00000523237 BRCC3P46736 316 aa17.7■□□□□ 0.42
CLN8-206ENST00000523237 ASIC4Q96FT7 647 aa17.7■□□□□ 0.42
CLN8-206ENST00000523237 HAPLN2Q9GZV7 340 aa17.7■□□□□ 0.42
CLN8-206ENST00000523237 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.7■□□□□ 0.42
CLN8-206ENST00000523237 BACE2Q9Y5Z0 518 aa17.7■□□□□ 0.42
CLN8-206ENST00000523237 I3L4J1 428 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 OGTO15294 1046 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 ADAM12O43184 909 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 ASGR2P07307 311 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 HSP90AA1P07900 732 aaKnown RBP17.69■□□□□ 0.42
CLN8-206ENST00000523237 NMT1P30419 496 aaKnown RBP17.69■□□□□ 0.42
CLN8-206ENST00000523237 OR1D2P34982 312 aa17.69■□□□□ 0.42
CLN8-206ENST00000523237 NASPP49321 788 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms