RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 PRSS55Q6UWB4 352 aaPredicted RBP11.92□□□□□ -0.5
PVT1-216ENST00000523068 GPBP1Q86WP2 473 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 GLYCTKQ8IVS8 523 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 SUGP1Q8IWZ8 645 aaKnown RBP11.92□□□□□ -0.5
PVT1-216ENST00000523068 CEP120Q8N960 986 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 KREMEN2Q8NCW0 462 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 LNX1Q8TBB1 728 aaPredicted RBP11.92□□□□□ -0.5
PVT1-216ENST00000523068 LARP4BQ92615 738 aaKnown RBP11.92□□□□□ -0.5
PVT1-216ENST00000523068 KCNN1Q92952 543 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 BICD1Q96G01 975 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 SNX27Q96L92 541 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 REEP2Q9BRK0 252 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 CCSER1Q9C0I3 900 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 PIDD1Q9HB75 910 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 PARVGQ9HBI0 331 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 ANKFY1Q9P2R3 1169 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 CCDC39Q9UFE4 941 aa11.92□□□□□ -0.5
PVT1-216ENST00000523068 NPHP3-ACAD11A0A0J9YXS1 232 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 ABLIM1O14639 778 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 RFPL2O75678 378 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 SPATA31D3P0C874 917 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 KCNE1P15382 129 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 RPL17P18621 184 aaKnown RBP11.91□□□□□ -0.5
PVT1-216ENST00000523068 DDIT3P35638 169 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 TXLNAP40222 546 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 MCL1Q07820 350 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 DHX8Q14562 1220 aaKnown RBP11.91□□□□□ -0.5
PVT1-216ENST00000523068 KYAT1Q16773 422 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 LIN9Q5TKA1 542 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 SPATA31D4Q6ZUB0 917 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 HAUS6Q7Z4H7 955 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 MYCT1Q8N699 235 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 SMG7Q92540 1137 aaKnown RBP11.91□□□□□ -0.5
PVT1-216ENST00000523068 RAD54LQ92698 747 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 CLSTN3Q9BQT9 956 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 ZSCAN16Q9H4T2 348 aaPredicted RBP11.91□□□□□ -0.5
PVT1-216ENST00000523068 WDR6Q9NNW5 1121 aaKnown RBP11.91□□□□□ -0.5
PVT1-216ENST00000523068 BLOC1S4Q9NUP1 217 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 CNTN3Q9P232 1028 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 LIMD1Q9UGP4 676 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.91□□□□□ -0.5
PVT1-216ENST00000523068 CLIC4Q9Y696 253 aa11.91□□□□□ -0.5
PVT1-216ENST00000523068 CLUHO75153 1309 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 K7ENM7 598 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 TRAK2O60296 914 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 TBCAO75347 108 aaKnown RBP11.9□□□□□ -0.5
PVT1-216ENST00000523068 ZMYND10O75800 440 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 FGFR3P22607 806 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 RPL9P32969 192 aaKnown RBP11.9□□□□□ -0.5
PVT1-216ENST00000523068 LIG4P49917 911 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 ZNF131P52739 623 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 GRIN1Q05586 938 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 MCM6Q14566 821 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 ANKS3Q6ZW76 656 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 RTL10Q7L3V2 364 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 FBXL6Q8N531 539 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 ZBTB45Q96K62 511 aaPredicted RBP11.9□□□□□ -0.5
PVT1-216ENST00000523068 PRRX2Q99811 253 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 PRKD2Q9BZL6 878 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 PLEKHA5Q9HAU0 1116 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 GOLGA2P5Q9HBQ8 144 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 MTRRQ9UBK8 725 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 STK17AQ9UEE5 414 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 FBXW11Q9UKB1 542 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 TBX20Q9UMR3 447 aa11.9□□□□□ -0.5
PVT1-216ENST00000523068 SRPRBQ9Y5M8 271 aaKnown RBP11.9□□□□□ -0.5
PVT1-216ENST00000523068 PODXLO00592 558 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 HNRNPDLO14979 420 aaKnown RBP11.89□□□□□ -0.51
PVT1-216ENST00000523068 STX6O43752 255 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 ASGR2P07307 311 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 HNRNPA1P09651 372 aaKnown RBP eCLIP11.89□□□□□ -0.51
PVT1-216ENST00000523068 MYBP10242 640 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 MARCKSP29966 332 aaPredicted RBP11.89□□□□□ -0.51
PVT1-216ENST00000523068 GBP2P32456 591 aaPredicted RBP11.89□□□□□ -0.51
PVT1-216ENST00000523068 OR1D2P34982 312 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 SOX4Q06945 474 aaPredicted RBP11.89□□□□□ -0.51
PVT1-216ENST00000523068 RESTQ13127 1097 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 RAB33AQ14088 237 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 PTPAQ15257 358 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 UVSSAQ2YD98 709 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 PPM1LQ5SGD2 360 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 KRI1Q8N9T8 703 aaKnown RBP11.89□□□□□ -0.51
PVT1-216ENST00000523068 ZNF707Q96C28 371 aaPredicted RBP11.89□□□□□ -0.51
PVT1-216ENST00000523068 ASIC4Q96FT7 647 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 EPSTI1Q96J88 318 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 ZMAT2Q96NC0 199 aaKnown RBP11.89□□□□□ -0.51
PVT1-216ENST00000523068 TSPAN18Q96SJ8 248 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 ZHX3Q9H4I2 956 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.89□□□□□ -0.516e-7■■■■□ 24.2
PVT1-216ENST00000523068 IGSF9Q9P2J2 1179 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 FBXO2Q9UK22 296 aaPredicted RBP11.89□□□□□ -0.51
PVT1-216ENST00000523068 NUB1Q9Y5A7 615 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 BACE2Q9Y5Z0 518 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 MORC2Q9Y6X9 1032 aaPredicted RBP11.89□□□□□ -0.51
PVT1-216ENST00000523068 ZNF318Q5VUA4 2279 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 ANK1P16157 1881 aa11.89□□□□□ -0.51
PVT1-216ENST00000523068 DOCK8Q8NF50 2099 aa11.88□□□□□ -0.51
PVT1-216ENST00000523068 SYN3O14994 580 aa11.88□□□□□ -0.51
PVT1-216ENST00000523068 XPOTO43592 962 aaKnown RBP11.88□□□□□ -0.51
PVT1-216ENST00000523068 XYLBO75191 536 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms