RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 RNF19AQ9NV58 838 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 IGSF9Q9P2J2 1179 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 SEL1LQ9UBV2 794 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 USP18Q9UMW8 372 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 CTNND2Q9UQB3 1225 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 GDAQ9Y2T3 454 aa11.88□□□□□ -0.51
MRPS28-208ENST00000521605 NFASCO94856 1347 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 DHX15O43143 795 aaKnown RBP11.87□□□□□ -0.51
MRPS28-208ENST00000521605 HOXA2O43364 376 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 LRRN2O75325 713 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 SLITRK3O94933 977 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 SFPQP23246 707 aaKnown RBP eCLIP11.87□□□□□ -0.51
MRPS28-208ENST00000521605 KLRC1P26715 233 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 JAK3P52333 1124 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 FAM189BP81408 668 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 MTMR1Q13613 665 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 BMT2Q1RMZ1 405 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 FAM26FQ5R3K3 315 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 ODR4Q5SWX8 454 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 NCAPH2Q6IBW4 605 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 KLHL10Q6JEL2 608 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 FAM228AQ86W67 206 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 ZC3H3Q8IXZ2 948 aaKnown RBP11.87□□□□□ -0.51
MRPS28-208ENST00000521605 SMYD4Q8IYR2 804 aaPredicted RBP11.87□□□□□ -0.51
MRPS28-208ENST00000521605 ST13P5Q8NFI4 369 aaPredicted RBP11.87□□□□□ -0.51
MRPS28-208ENST00000521605 SLC22A17Q8WUG5 538 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 CACTINQ8WUQ7 758 aaKnown RBP11.87□□□□□ -0.51
MRPS28-208ENST00000521605 TMEM174Q8WUU8 243 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 CCDC51Q96ER9 411 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 TMEM169Q96HH4 297 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 NAP1L5Q96NT1 182 aaPredicted RBP11.87□□□□□ -0.51
MRPS28-208ENST00000521605 FOXQ1Q9C009 403 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 ZBP1Q9H171 429 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 AGO4Q9HCK5 861 aaKnown RBP11.87□□□□□ -0.51
MRPS28-208ENST00000521605 JPH1Q9HDC5 661 aaPredicted RBP11.87□□□□□ -0.51
MRPS28-208ENST00000521605 OLFML3Q9NRN5 406 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 KCNH7Q9NS40 1196 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 INTS13Q9NVM9 706 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 ODF2LQ9ULJ1 636 aa11.87□□□□□ -0.51
MRPS28-208ENST00000521605 UBE4BO95155 1302 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 FANCMQ8IYD8 2048 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 DKC1O60832 514 aaKnown RBP eCLIP11.86□□□□□ -0.51
MRPS28-208ENST00000521605 N4BP1O75113 896 aaKnown RBP11.86□□□□□ -0.51
MRPS28-208ENST00000521605 GNA14O95837 355 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 TUBB4AP04350 444 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 P4HBP07237 508 aaKnown RBP11.86□□□□□ -0.51
MRPS28-208ENST00000521605 GLULP15104 373 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 GUCY2CP25092 1073 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 ALDH7A1P49419 539 aaKnown RBP11.86□□□□□ -0.51
MRPS28-208ENST00000521605 STAT5BP51692 787 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 BCAR1P56945 870 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 LMNB2Q03252 620 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 ZCWPW2Q504Y3 356 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 ARSHQ5FYA8 562 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 CLLU1OSQ5K130 101 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 ZNF746Q6NUN9 644 aaPredicted RBP11.86□□□□□ -0.51
MRPS28-208ENST00000521605 TMC6Q7Z403 805 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 GPBP1Q86WP2 473 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 TMEM173Q86WV6 379 aaPredicted RBP11.86□□□□□ -0.51
MRPS28-208ENST00000521605 IRF2BP1Q8IU81 584 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 KIAA0319LQ8IZA0 1049 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 MAML2Q8IZL2 1156 aaPredicted RBP11.86□□□□□ -0.51
MRPS28-208ENST00000521605 SLC44A3Q8N4M1 653 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 HELQQ8TDG4 1101 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 CEP63Q96MT8 703 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 PLIN2Q99541 437 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 DUSP9Q99956 384 aaKnown RBP11.86□□□□□ -0.51
MRPS28-208ENST00000521605 RTKNQ9BST9 563 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 ARHGEF3Q9NR81 526 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 PANK4Q9NVE7 773 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 DLGAP2Q9P1A6 1054 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 COL4A3BPQ9Y5P4 624 aa11.86□□□□□ -0.51
MRPS28-208ENST00000521605 GPR179Q6PRD1 2367 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 C2orf16Q68DN1 1984 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 PRR5-ARHGAP8B1AHC4 643 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 KCNJ18B7U540 433 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 E9PMD0 336 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 EML1O00423 815 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 CCP110O43303 1012 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 ZC3H11AO75152 810 aaKnown RBP eCLIP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 OFD1O75665 1012 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 VTNP04004 478 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 MYBP10242 640 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 MAPTP10636 758 aaKnown RBP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 SRFP11831 508 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 FECHP22830 423 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 ZNF131P52739 623 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 COPB1P53618 953 aaKnown RBP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 TERF1P54274 439 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 MARSP56192 900 aaKnown RBP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 ARHGAP8P85298 464 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 CCZ1BP86790 482 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 CCZ1P86791 482 aaPredicted RBP11.85□□□□□ -0.51
MRPS28-208ENST00000521605 GIT2Q14161 759 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 KCNJ12Q14500 433 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 DSC3Q14574 896 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 KRT31Q15323 416 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 PTPN14Q15678 1187 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 NFIL3Q16649 462 aa11.85□□□□□ -0.51
MRPS28-208ENST00000521605 EDRF1Q3B7T1 1238 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms