RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ITPR2Q14571 2701 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 KNTC1P50748 2209 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 GOLGA6L22H0YM25 854 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 GCOM1H8Y6P7 765 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 RNF113AO15541 343 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 ZNF862O60290 1169 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 CSDE1O75534 798 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 POLR2MP0CAP2 368 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 KRT10P13645 584 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 ENGP17813 658 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 ITGB5P18084 799 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 ST3GAL1Q11201 340 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 TSGA10IPQ3SY00 556 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 MCMDC2Q4G0Z9 681 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 L1TD1Q5T7N2 865 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 PMS2CLQ68D20 193 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 PDXDC1Q6P996 788 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 TMPRSS7Q7RTY8 843 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 PLPPR4Q7Z2D5 763 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 TMC8Q8IU68 726 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 ZSCAN31Q96LW9 406 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 TMEM175Q9BSA9 504 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 TRAIPQ9BWF2 469 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 AMNQ9BXJ7 453 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 GPR62Q9BZJ7 368 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 TMEM74BQ9NUR3 256 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 PKD2L1Q9P0L9 805 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 FNIP2Q9P278 1114 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 IL17BQ9UHF5 180 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 ANAPC4Q9UJX5 808 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 BRPF3Q9ULD4 1205 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 POLIQ9UNA4 740 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 INVSQ9Y283 1065 aa8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 PRG3Q9Y2Y8 225 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-227ENST00000521387 TEX51A0A1B0GUA7 166 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 MYBPHLA2RUH7 354 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 GOLGA6L3A6NEY3 463 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 ADAM12O43184 909 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 SLC28A2O43868 658 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 DTNBO60941 627 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 PRPF40AO75400 957 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 C22orf31O95567 290 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 C8AP07357 584 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 POU2F2P09086 479 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 ATP4AP20648 1035 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 BCKDHBP21953 392 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 EIF4BP23588 611 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 HOXA9P31269 272 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 VIPR2P41587 438 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 STAT5BP51692 787 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 NLRP11P59045 1033 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 RNASELQ05823 741 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 TRIP6Q15654 476 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 PABPC1LQ4VXU2 614 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 TRIM61Q5EBN2 209 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 PPM1LQ5SGD2 360 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 ZMYM1Q5SVZ6 1142 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 GLB1LQ6UWU2 654 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 AGMOQ6ZNB7 445 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 GAS2L3Q86XJ1 694 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 CCDC83Q8IWF9 413 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 LINC01465Q8N7H1 131 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 GIMAP8Q8ND71 665 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 RSPRY1Q96DX4 576 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 DDX27Q96GQ7 796 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 ZSWIM3Q96MP5 696 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 NACAP1Q9BZK3 213 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 POLMQ9NP87 494 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 HELLSQ9NRZ9 838 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 HSPBP1Q9NZL4 362 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 NXF1Q9UBU9 619 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 MRPS23Q9Y3D9 190 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 FBN3Q75N90 2809 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 MYH6P13533 1939 aa8.19□□□□□ -1.1
CTNNA1-227ENST00000521387 SLC38A8A6NNN8 435 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 TLX3O43711 291 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 SH3BP5O60239 455 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 XRCC6P12956 609 aaKnown RBP eCLIP8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 PSMC3P17980 439 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 RPS6KB1P23443 525 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 PSMA5P28066 241 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 EIF2S3P41091 472 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 LMAN2Q12907 356 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 PON2Q15165 354 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 ME3Q16798 604 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 KLHL40Q2TBA0 621 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 PRSS36Q5K4E3 855 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 RNF20Q5VTR2 975 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 PCNX4Q63HM2 1172 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 BLOC1S2Q6QNY1 142 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 TOGARAM2Q6ZUX3 1019 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 GPR155Q7Z3F1 870 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 COLGALT2Q8IYK4 626 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 STAG2Q8N3U4 1231 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 SYNPOQ8N3V7 929 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 NECAB1Q8N987 351 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 DAGLBQ8NCG7 672 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 OR2I1PQ8NGU4 316 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 RSPH1Q8WYR4 309 aa8.18□□□□□ -1.1
CTNNA1-227ENST00000521387 PIGKQ92643 395 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms