RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CLEC16AQ2KHT3 1053 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 ERICH6BQ5W0A0 696 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 MAML2Q8IZL2 1156 aaPredicted RBP4.67□□□□□ -1.66
VPS13B-208ENST00000521037 MAGEB6Q8N7X4 407 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 GATAD2BQ8WXI9 593 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 MRFAP1L1Q96HT8 127 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 GPATCH3Q96I76 525 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 KIF2CQ99661 725 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 METTL14Q9HCE5 456 aaKnown RBP4.67□□□□□ -1.66
VPS13B-208ENST00000521037 PDGFCQ9NRA1 345 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 ZMYM5Q9UJ78 669 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 CNOT11Q9UKZ1 510 aaKnown RBP4.67□□□□□ -1.66
VPS13B-208ENST00000521037 USP15Q9Y4E8 981 aaPredicted RBP4.67□□□□□ -1.66
VPS13B-208ENST00000521037 SCN10AQ9Y5Y9 1956 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 hCG_2014768A0A024R1R8 64 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 EYA2O00167 538 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 HTR3BO95264 441 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 LMNAP02545 664 aaKnown RBP4.66□□□□□ -1.66
VPS13B-208ENST00000521037 MPOP05164 745 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 IFIT1P09914 478 aaKnown RBP4.66□□□□□ -1.66
VPS13B-208ENST00000521037 RLBP1P12271 317 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 PMLP29590 882 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 SLURP1P55000 103 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 PURAQ00577 322 aaKnown RBP4.66□□□□□ -1.66
VPS13B-208ENST00000521037 LMNB2Q03252 620 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 CAMK2GQ13555 558 aaPredicted RBP4.66□□□□□ -1.66
VPS13B-208ENST00000521037 SNW1Q13573 536 aaKnown RBP4.66□□□□□ -1.66
VPS13B-208ENST00000521037 SEPT2Q15019 361 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 FSCN1Q16658 493 aaKnown RBP4.66□□□□□ -1.66
VPS13B-208ENST00000521037 HSF5Q4G112 596 aaPredicted RBP4.66□□□□□ -1.66
VPS13B-208ENST00000521037 TAF7LQ5H9L4 462 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 MCTP2Q6DN12 878 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 SLCO6A1Q86UG4 719 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 MAPKAPK5Q8IW41 473 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 CCDC105Q8IYK2 499 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 ATP8B4Q8TF62 1192 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 RUNDC1Q96C34 613 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 MMP19Q99542 508 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 BDH2Q9BUT1 245 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 S1PR5Q9H228 398 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 DHX36Q9H2U1 1008 aaKnown RBP4.66□□□□□ -1.66
VPS13B-208ENST00000521037 PNNQ9H307 717 aaKnown RBP4.66□□□□□ -1.66
VPS13B-208ENST00000521037 TMX1Q9H3N1 280 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 TNFRSF12AQ9NP84 129 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 HOXC10Q9NYD6 342 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 HMG20BQ9P0W2 317 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 DLGAP2Q9P1A6 1054 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 TNFRSF10DQ9UBN6 386 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 CD207Q9UJ71 328 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 CDH22Q9UJ99 828 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 ACSL6Q9UKU0 697 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 ZHX1Q9UKY1 873 aaPredicted RBP4.66□□□□□ -1.66
VPS13B-208ENST00000521037 DENND2AQ9ULE3 1009 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 STRIP2Q9ULQ0 834 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 WASF3Q9UPY6 502 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 R4GN57 208 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 FANCMQ8IYD8 2048 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 COL12A1Q99715 3063 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 LCTP09848 1927 aa4.66□□□□□ -1.66
VPS13B-208ENST00000521037 MCM3APO60318 1980 aa4.65□□□□□ -1.66
VPS13B-208ENST00000521037 IGF2RP11717 2491 aa4.65□□□□□ -1.66
VPS13B-208ENST00000521037 RALGAPA2Q2PPJ7 1873 aa4.65□□□□□ -1.66
VPS13B-208ENST00000521037 COL4A3Q01955 1670 aa4.65□□□□□ -1.66
VPS13B-208ENST00000521037 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.65□□□□□ -1.67
VPS13B-208ENST00000521037 KIF28PB7ZC32 967 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 TAF4O00268 1085 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 VWA5AO00534 786 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 BUB1BO60566 1050 aaPredicted RBP4.65□□□□□ -1.67
VPS13B-208ENST00000521037 RAB11FIP3O75154 756 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 VAMP4O75379 141 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 CABYRO75952 493 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 SLC25A27O95847 323 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 IBSPP21815 317 aaPredicted RBP4.65□□□□□ -1.67
VPS13B-208ENST00000521037 PLCD1P51178 756 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 CLCN5P51795 746 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 NCKAP1LP55160 1127 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 PCBP3P57721 371 aaKnown RBP4.65□□□□□ -1.67
VPS13B-208ENST00000521037 GNAI1P63096 354 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 IGBP1P78318 339 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 SHC2P98077 582 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 GPM6BQ13491 265 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 PWP1Q13610 501 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 ANGPT1Q15389 498 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 VWA3BQ502W6 1294 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 RNF187Q5TA31 235 aaPredicted RBP4.65□□□□□ -1.67
VPS13B-208ENST00000521037 ARMCX2Q7L311 632 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 TMEM192Q8IY95 271 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 CCDC144CPQ8IYA2 1237 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 TEX11Q8IYF3 940 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 MB21D1Q8N884 522 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 FAM133AQ8N9E0 248 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 TMEM52Q8NDY8 209 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 MICAL1Q8TDZ2 1067 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 TGFBRAP1Q8WUH2 860 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 RHOVQ96L33 236 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 PHF7Q9BWX1 381 aaPredicted RBP4.65□□□□□ -1.67
VPS13B-208ENST00000521037 SEZ6LQ9BYH1 1024 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 ABHD16BQ9H3Z7 469 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 INCENPQ9NQS7 918 aa4.65□□□□□ -1.67
VPS13B-208ENST00000521037 FAM50BQ9Y247 325 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms