RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 SYN1P17600 705 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 SLC9A1P19634 815 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 FECHP22830 423 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 CD52P31358 61 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 CLCN1P35523 988 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 GOLGA8FQ08AF8 430 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 GOLGA8DPQ0D2H9 430 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 DSC3Q14574 896 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 SLC10A6Q3KNW5 377 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 DNTTIP2Q5QJE6 756 aaKnown RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 TDRD10Q5VZ19 366 aaKnown RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 LMBRD2Q68DH5 695 aaPredicted RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 SV2AQ7L0J3 742 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 TMEM139Q8IV31 216 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 EFCAB13Q8IY85 973 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 FBXL13Q8NEE6 735 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 NEK11Q8NG66 645 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 BAP1Q92560 729 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 FAM84AQ96KN4 292 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 ZNF830Q96NB3 372 aaPredicted RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 DNAJC7Q99615 494 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 BAG1Q99933 345 aaPredicted RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 TRAIPQ9BWF2 469 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 LSM14BQ9BX40 385 aaKnown RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 NUCKS1Q9H1E3 243 aaKnown RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 TMX1Q9H3N1 280 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 NXF3Q9H4D5 531 aaKnown RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 ASB7Q9H672 318 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 MMRN2Q9H8L6 949 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 RPF1Q9H9Y2 349 aaKnown RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 FAM207AQ9NSI2 230 aaPredicted RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 CEP72Q9P209 647 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 ZMYND8Q9ULU4 1186 aaPredicted RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 PADI3Q9ULW8 664 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 CAPN11Q9UMQ6 739 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 LUC7L2Q9Y383 392 aaKnown RBP9.22□□□□□ -0.93
VAPB-206ENST00000520497 DAAM1Q9Y4D1 1078 aa9.22□□□□□ -0.93
VAPB-206ENST00000520497 KIAA1671Q9BY89 1806 aa9.21□□□□□ -0.93
VAPB-206ENST00000520497 LACTBL1A8MY62 500 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 PQBP1O60828 265 aaKnown RBP9.21□□□□□ -0.94
VAPB-206ENST00000520497 IPO7O95373 1038 aaKnown RBP9.21□□□□□ -0.94
VAPB-206ENST00000520497 VNN1O95497 513 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 ACTN1P12814 892 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 TNNI1P19237 187 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 KRT9P35527 623 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 AP3M2P53677 418 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 ATN1P54259 1190 aaPredicted RBP9.21□□□□□ -0.94
VAPB-206ENST00000520497 ADKP55263 362 aaKnown RBP9.21□□□□□ -0.94
VAPB-206ENST00000520497 OSTNP61366 133 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 ZBED6P86452 979 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 CCZ1BP86790 482 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 CCZ1P86791 482 aaPredicted RBP9.21□□□□□ -0.94
VAPB-206ENST00000520497 APBA1Q02410 837 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 FAAP100Q0VG06 881 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 CETN1Q12798 172 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 LRMPQ12912 555 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 NFX1Q12986 1120 aaKnown RBP9.21□□□□□ -0.94
VAPB-206ENST00000520497 PAK2Q13177 524 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 BFSP2Q13515 415 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 TRIM60Q495X7 471 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 KLHDC7AQ5VTJ3 777 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 TWF2Q6IBS0 349 aaKnown RBP9.21□□□□□ -0.94
VAPB-206ENST00000520497 ALKAL1Q6UXT8 129 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 LRRC8DQ7L1W4 858 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 NT5DC4Q86YG4 428 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 TMTC1Q8IUR5 882 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 FMNL3Q8IVF7 1028 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 CD302Q8IX05 232 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 C7orf61Q8IZ16 206 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 SMG8Q8ND04 991 aaKnown RBP9.21□□□□□ -0.94
VAPB-206ENST00000520497 EHBP1Q8NDI1 1231 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 OR5B17Q8NGF7 314 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 KIAA1524Q8TCG1 905 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 TAS1R2Q8TE23 839 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 SEMA4DQ92854 862 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 SNX27Q96L92 541 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 ACAP3Q96P50 834 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 CCDC94Q9BW85 323 aaPredicted RBP9.21□□□□□ -0.94
VAPB-206ENST00000520497 MTMR12Q9C0I1 747 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 INTS2Q9H0H0 1204 aaKnown RBP9.21□□□□□ -0.94
VAPB-206ENST00000520497 C11orf49Q9H6J7 331 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 PLEKHA5Q9HAU0 1116 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 ABHD10Q9NUJ1 306 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 C2CD2Q9Y426 696 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 HES2Q9Y543 173 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 IPPQ9Y573 584 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 VWA8A3KMH1 1905 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 CEP290O15078 2479 aa9.21□□□□□ -0.94
VAPB-206ENST00000520497 DCDC2CA8MYV0 355 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 EVI5O60447 810 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 MGEA5O60502 916 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 ZNF623O75123 536 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 ZC3H11AO75152 810 aaKnown RBP eCLIP9.2□□□□□ -0.94
VAPB-206ENST00000520497 LRRN2O75325 713 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 RECQL4O94761 1208 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 HLA-DRAP01903 254 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 TUBB4AP04350 444 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 NFICP08651 508 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 UCHL3P15374 230 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms