RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 TMEM173Q86WV6 379 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-206ENST00000519115 ZNF280BQ86YH2 543 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 SLC9A9Q8IVB4 645 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 FAM178BQ8IXR5 827 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 C12orf56Q8IXR9 622 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 HACE1Q8IYU2 909 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 AOPEPQ8N6M6 819 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 CEP120Q8N960 986 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 RNF214Q8ND24 703 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 NELFBQ8WX92 580 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 ERCC4Q92889 916 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-206ENST00000519115 P2RX5Q93086 422 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 MRPL38Q96DV4 380 aaKnown RBP8.27□□□□□ -1.09
SDCBP-206ENST00000519115 BICD1Q96G01 975 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 ZBTB45Q96K62 511 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-206ENST00000519115 ACO2Q99798 780 aaKnown RBP8.27□□□□□ -1.09
SDCBP-206ENST00000519115 PLVAPQ9BX97 442 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 CDT1Q9H211 546 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 CXCL16Q9H2A7 254 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 HSD3B7Q9H2F3 369 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 NRDE2Q9H7Z3 1164 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 TMEM206Q9H813 350 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 PRDM6Q9NQX0 595 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 AAASQ9NRG9 546 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 SNTG2Q9NY99 539 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 DNAJB4Q9UDY4 337 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 LIMA1Q9UHB6 759 aaKnown RBP8.27□□□□□ -1.09
SDCBP-206ENST00000519115 PLAGL2Q9UPG8 496 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 TNFSF13BQ9Y275 285 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 NFE2L3Q9Y4A8 694 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 PCDHB12Q9Y5F1 795 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 PCDHGC5Q9Y5F6 944 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 TCF20Q9UGU0 1960 aaKnown RBP8.27□□□□□ -1.09
SDCBP-206ENST00000519115 ABLIM1O14639 778 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 HNRNPDLO14979 420 aaKnown RBP8.26□□□□□ -1.09
SDCBP-206ENST00000519115 KIAA0391O15091 583 aaKnown RBP8.26□□□□□ -1.09
SDCBP-206ENST00000519115 PPP1R37O75864 691 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 DDHD2O94830 711 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 ADCY5O95622 1261 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 TPM2P07951 284 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 POU3F3P20264 500 aaPredicted RBP8.26□□□□□ -1.09
SDCBP-206ENST00000519115 CDK11BP21127 795 aaKnown RBP8.26□□□□□ -1.09
SDCBP-206ENST00000519115 DNAJB1P25685 340 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 CASP1P29466 404 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 MATR3P43243 847 aaKnown RBP eCLIP8.26□□□□□ -1.09
SDCBP-206ENST00000519115 SLC11A1P49279 550 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 LIG4P49917 911 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 BCAR1P56945 870 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 POU5F1Q01860 360 aaKnown RBP8.26□□□□□ -1.09
SDCBP-206ENST00000519115 PTPROQ16827 1216 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 TPD52L1Q16890 204 aaPredicted RBP8.26□□□□□ -1.09
SDCBP-206ENST00000519115 FILIP1LQ4L180 1135 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 ZCWPW2Q504Y3 356 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 ZC2HC1CQ53FD0 456 aaPredicted RBP8.26□□□□□ -1.09
SDCBP-206ENST00000519115 MPZL3Q6UWV2 235 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 KIAA0895Q8NCT3 520 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 SPPL3Q8TCT6 385 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 BCL7CQ8WUZ0 217 aaPredicted RBP8.26□□□□□ -1.09
SDCBP-206ENST00000519115 POF1BQ8WVV4 589 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 FAM193BQ96PV7 902 aaPredicted RBP8.26□□□□□ -1.09
SDCBP-206ENST00000519115 MED15Q96RN5 788 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 RPS6KC1Q96S38 1066 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 FIZ1Q96SL8 496 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 TCHPQ9BT92 498 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 MKNK1Q9BUB5 465 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 FGFBP2Q9BYJ0 223 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 TRIM5Q9C035 493 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 IKZF4Q9H2S9 585 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 KCTD10Q9H3F6 313 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 METTL14Q9HCE5 456 aaKnown RBP8.26□□□□□ -1.09
SDCBP-206ENST00000519115 PLSCR2Q9NRY7 297 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 FANCLQ9NW38 375 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 MIOSQ9NXC5 875 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 SPG21Q9NZD8 308 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 CACNG4Q9UBN1 327 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 TBX20Q9UMR3 447 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 EXOC7Q9UPT5 735 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 A0A0C4DFX4 3053 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 VWA8A3KMH1 1905 aa8.26□□□□□ -1.09
SDCBP-206ENST00000519115 A0A1B0GTH6 734 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 A0A1W2PQC6 194 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 TISP43B9A030 160 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 F8W810 466 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 CETN3O15182 167 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 CALUO43852 315 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-206ENST00000519115 TOM1L1O75674 476 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 MYBP10242 640 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 PROZP22891 400 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 IRS1P35568 1242 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 PPM1AP35813 382 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 ALDH7A1P49419 539 aaKnown RBP8.25□□□□□ -1.09
SDCBP-206ENST00000519115 ZNF75DP51815 510 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 CASP5P51878 434 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 UBASH3AP57075 661 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 GSDMDP57764 484 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 FANCCQ00597 558 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 GRIK3Q13003 919 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 CAMK1Q14012 370 aa8.25□□□□□ -1.09
SDCBP-206ENST00000519115 NOLC1Q14978 699 aaKnown RBP eCLIP8.25□□□□□ -1.09
SDCBP-206ENST00000519115 NR1I3Q14994 352 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms