RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 NPTX2P47972 431 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ECM1Q16610 540 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 UPP1Q16831 310 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 KRT79Q5XKE5 535 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 FGF13Q92913 245 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 TIPINQ9BVW5 301 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CDT1Q9H211 546 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CXCL16Q9H2A7 254 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 C17orf75Q9HAS0 396 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 POLIQ9UNA4 740 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 KIF3AQ9Y496 699 aa16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 RBM19Q9Y4C8 960 aaKnown RBP16.03■□□□□ 0.16
SCARNA20.5-201ENST00000516991 MIA3Q5JRA6 1907 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 SEC24BO95487 1268 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 PRPHP41219 470 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CLCNKBP51801 687 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 PEX3P56589 373 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 NTHL1P78549 312 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 PTGDRQ13258 359 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 NBR1Q14596 966 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 PABPC1LQ4VXU2 614 aaKnown RBP16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 XKR4Q5GH76 650 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ZC3H14Q6PJT7 736 aaKnown RBP16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ACO2Q99798 780 aaKnown RBP16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 ARHGAP28Q9P2N2 729 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 SIT1Q9Y3P8 196 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 CDY1Q9Y6F8 540 aa16.02■□□□□ 0.16
SCARNA20.5-201ENST00000516991 VPS13AQ96RL7 3174 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 SMIM28A0A1B0GU29 152 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 HIP1RO75146 1068 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 MCF2P10911 925 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 TKTP29401 623 aaKnown RBP16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 STARD6P59095 220 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 FOXK2Q01167 660 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 PFKPQ01813 784 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 PARM1Q6UWI2 310 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 ADSSL1Q8N142 457 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 PJA1Q8NG27 643 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 FGF14Q92915 247 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 SNX27Q96L92 541 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 PTPRHQ9HD43 1115 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 KMT5AQ9NQR1 393 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 KCNG1Q9UIX4 513 aa16.01■□□□□ 0.15
SCARNA20.5-201ENST00000516991 SYN3O14994 580 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 KCNE1P15382 129 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 PRKCQQ04759 706 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 SLC8B1Q6J4K2 584 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 MPZL3Q6UWV2 235 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 ALKAL1Q6UXT8 129 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 DTHD1Q6ZMT9 781 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 NPAS3Q8IXF0 933 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 DAW1Q8N136 415 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 KCTD17Q8N5Z5 321 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 CEP120Q8N960 986 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 C3orf58Q8NDZ4 430 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 ITFG1Q8TB96 612 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 ACAP3Q96P50 834 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 GOLGA2P5Q9HBQ8 144 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 POLD4Q9HCU8 107 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 AVENQ9NQS1 362 aaPredicted RBP16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 DLGAP2Q9P1A6 1054 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 PCDHB6Q9Y5E3 794 aa16■□□□□ 0.15
SCARNA20.5-201ENST00000516991 NOTCH4Q99466 2003 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 MYH11P35749 1972 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 ARHGEF37A1IGU5 675 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 E9PMD0 336 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 H7C4K7 107 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 PODXLO00592 558 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 DCNP07585 359 aaKnown RBP15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 PROZP22891 400 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 GUCY2CP25092 1073 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 ELF1P32519 619 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 RPL9P32969 192 aaKnown RBP15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 BRCC3P46736 316 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 TOB1P50616 345 aaPredicted RBP15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 GPC5P78333 572 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 ROR1Q01973 937 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 SOX4Q06945 474 aaPredicted RBP15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 STRN3Q13033 797 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 MAPK7Q13164 816 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 MLF2Q15773 248 aaPredicted RBP15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 SPECC1Q5M775 1068 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 RINT1Q6NUQ1 792 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 CD300LGQ6UXG3 332 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 RSPO2Q6UXX9 243 aaPredicted RBP15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 TAS1R3Q7RTX0 852 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 TCHPQ9BT92 498 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 RUSC1Q9BVN2 902 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 TARS2Q9BW92 718 aaKnown RBP15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 GDE1Q9NZC3 331 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 CNTN3Q9P232 1028 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 DNMT3BQ9UBC3 853 aaKnown RBP15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 MRPS23Q9Y3D9 190 aaKnown RBP15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 PDCD11Q14690 1871 aaKnown RBP15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 FANCMQ8IYD8 2048 aa15.99■□□□□ 0.15
SCARNA20.5-201ENST00000516991 MYO15AQ9UKN7 3530 aa15.98■□□□□ 0.15
SCARNA20.5-201ENST00000516991 EP300Q09472 2414 aaPredicted RBP15.98■□□□□ 0.15
SCARNA20.5-201ENST00000516991 KANSL1LA0AUZ9 987 aa15.98■□□□□ 0.15
SCARNA20.5-201ENST00000516991 I3L4J1 428 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms