RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 ZNF131P52739 623 aa21.39■■□□□ 1.01
DDR1-280ENST00000515881 MCL1Q07820 350 aa21.39■■□□□ 1.01
DDR1-280ENST00000515881 MTMR3Q13615 1198 aa21.39■■□□□ 1.01
DDR1-280ENST00000515881 FAM173BQ6P4H8 233 aa21.39■■□□□ 1.01
DDR1-280ENST00000515881 CD300LGQ6UXG3 332 aa21.39■■□□□ 1.01
DDR1-280ENST00000515881 C3orf58Q8NDZ4 430 aa21.39■■□□□ 1.01
DDR1-280ENST00000515881 SMG7Q92540 1137 aaKnown RBP21.39■■□□□ 1.01
DDR1-280ENST00000515881 LARP4BQ92615 738 aaKnown RBP21.39■■□□□ 1.01
DDR1-280ENST00000515881 ZNF707Q96C28 371 aaPredicted RBP21.39■■□□□ 1.01
DDR1-280ENST00000515881 ASIC4Q96FT7 647 aa21.39■■□□□ 1.01
DDR1-280ENST00000515881 DDX27Q96GQ7 796 aaKnown RBP21.39■■□□□ 1.01
DDR1-280ENST00000515881 PARVGQ9HBI0 331 aa21.39■■□□□ 1.01
DDR1-280ENST00000515881 FOXD4L1Q9NU39 408 aa21.39■■□□□ 1.01
DDR1-280ENST00000515881 LIMD1Q9UGP4 676 aa21.39■■□□□ 1.01
DDR1-280ENST00000515881 FBXO2Q9UK22 296 aaPredicted RBP21.39■■□□□ 1.01
DDR1-280ENST00000515881 MTMR6Q9Y217 621 aa21.39■■□□□ 1.01
DDR1-280ENST00000515881 CLDN3O15551 220 aa21.38■■□□□ 1.01
DDR1-280ENST00000515881 TRAPPC3O43617 180 aa21.38■■□□□ 1.01
DDR1-280ENST00000515881 FAM13AO94988 1023 aa21.38■■□□□ 1.01
DDR1-280ENST00000515881 KRT18P05783 430 aaKnown RBP21.38■■□□□ 1.01
DDR1-280ENST00000515881 ASGR2P07307 311 aa21.38■■□□□ 1.01
DDR1-280ENST00000515881 SCP2P22307 547 aa21.38■■□□□ 1.01
DDR1-280ENST00000515881 MARCKSP29966 332 aaPredicted RBP21.38■■□□□ 1.01
DDR1-280ENST00000515881 SEZ6Q53EL9 994 aa21.38■■□□□ 1.01
DDR1-280ENST00000515881 UBALD2Q8IYN6 164 aa21.38■■□□□ 1.01
DDR1-280ENST00000515881 MYCT1Q8N699 235 aa21.38■■□□□ 1.01
DDR1-280ENST00000515881 BICD1Q96G01 975 aa21.38■■□□□ 1.01
DDR1-280ENST00000515881 EPSTI1Q96J88 318 aa21.38■■□□□ 1.01
DDR1-280ENST00000515881 WDR6Q9NNW5 1121 aaKnown RBP21.38■■□□□ 1.01
DDR1-280ENST00000515881 FBXW11Q9UKB1 542 aa21.38■■□□□ 1.01
DDR1-280ENST00000515881 SRPRBQ9Y5M8 271 aaKnown RBP21.38■■□□□ 1.01
DDR1-280ENST00000515881 TECTAO75443 2155 aa21.37■■□□□ 1.01
DDR1-280ENST00000515881 CLUHO75153 1309 aa21.37■■□□□ 1.01
DDR1-280ENST00000515881 K7ENM7 598 aa21.37■■□□□ 1.01
DDR1-280ENST00000515881 ADAM12O43184 909 aa21.37■■□□□ 1.01
DDR1-280ENST00000515881 ZMYND10O75800 440 aa21.37■■□□□ 1.01
DDR1-280ENST00000515881 SLC10A6Q3KNW5 377 aa21.37■■□□□ 1.01
DDR1-280ENST00000515881 SPECC1Q5M775 1068 aa21.37■■□□□ 1.01
DDR1-280ENST00000515881 USP49Q70CQ1 688 aa21.37■■□□□ 1.01
DDR1-280ENST00000515881 TBX20Q9UMR3 447 aa21.37■■□□□ 1.01
DDR1-280ENST00000515881 PLXNA3P51805 1871 aa21.37■■□□□ 1.01
DDR1-280ENST00000515881 I3L4J1 428 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 PODXLO00592 558 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 TRAK2O60296 914 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 TBCAO75347 108 aaKnown RBP21.36■■□□□ 1.01
DDR1-280ENST00000515881 DDIT3P35638 169 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 MATR3P43243 847 aaKnown RBP eCLIP21.36■■□□□ 1.01
DDR1-280ENST00000515881 BRCC3P46736 316 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 CEBPZQ03701 1054 aaKnown RBP21.36■■□□□ 1.01
DDR1-280ENST00000515881 SUGP1Q8IWZ8 645 aaKnown RBP21.36■■□□□ 1.01
DDR1-280ENST00000515881 FBXL6Q8N531 539 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 STAMQ92783 540 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 C18orf25Q96B23 403 aaPredicted RBP21.36■■□□□ 1.01
DDR1-280ENST00000515881 PRKD2Q9BZL6 878 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 HAPLN2Q9GZV7 340 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 KCNH6Q9H252 994 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 ZHX3Q9H4I2 956 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 PIDD1Q9HB75 910 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 MTRRQ9UBK8 725 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 CCDC39Q9UFE4 941 aa21.36■■□□□ 1.01
DDR1-280ENST00000515881 DENND4AQ7Z401 1863 aa21.35■■□□□ 1.01
DDR1-280ENST00000515881 HNRNPDLO14979 420 aaKnown RBP21.35■■□□□ 1.01
DDR1-280ENST00000515881 PIGRP01833 764 aa21.35■■□□□ 1.01
DDR1-280ENST00000515881 CLTAP09496 248 aa21.35■■□□□ 1.01
DDR1-280ENST00000515881 TKTP29401 623 aaKnown RBP21.35■■□□□ 1.01
DDR1-280ENST00000515881 RPL9P32969 192 aaKnown RBP21.35■■□□□ 1.01
DDR1-280ENST00000515881 LIG4P49917 911 aa21.35■■□□□ 1.01
DDR1-280ENST00000515881 RAB33AQ14088 237 aa21.35■■□□□ 1.01
DDR1-280ENST00000515881 LIN9Q5TKA1 542 aa21.35■■□□□ 1.01
DDR1-280ENST00000515881 ANKS3Q6ZW76 656 aa21.35■■□□□ 1.01
DDR1-280ENST00000515881 CLIC6Q96NY7 704 aa21.35■■□□□ 1.01
DDR1-280ENST00000515881 SMOC2Q9H3U7 446 aa21.35■■□□□ 1.01
DDR1-280ENST00000515881 ZSCAN16Q9H4T2 348 aaPredicted RBP21.35■■□□□ 1.01
DDR1-280ENST00000515881 STK17AQ9UEE5 414 aa21.35■■□□□ 1.01
DDR1-280ENST00000515881 BACE2Q9Y5Z0 518 aa21.35■■□□□ 1.01
DDR1-280ENST00000515881 STX6O43752 255 aa21.34■■□□□ 1.01
DDR1-280ENST00000515881 N4BP1O75113 896 aaKnown RBP21.34■■□□□ 1.01
DDR1-280ENST00000515881 CXCL8P10145 99 aa21.34■■□□□ 1.01
DDR1-280ENST00000515881 OR1D2P34982 312 aa21.34■■□□□ 1.01
DDR1-280ENST00000515881 TXLNAP40222 546 aa21.34■■□□□ 1.01
DDR1-280ENST00000515881 USP28Q96RU2 1077 aa21.34■■□□□ 1.01
DDR1-280ENST00000515881 FIZ1Q96SL8 496 aa21.34■■□□□ 1.01
DDR1-280ENST00000515881 PLEKHA5Q9HAU0 1116 aa21.34■■□□□ 1.01
DDR1-280ENST00000515881 MORC2Q9Y6X9 1032 aaPredicted RBP21.34■■□□□ 1.01
DDR1-280ENST00000515881 C8AP07357 584 aa21.33■■□□□ 1.01
DDR1-280ENST00000515881 HNRNPA1P09651 372 aaKnown RBP eCLIP21.33■■□□□ 1.01
DDR1-280ENST00000515881 GBP2P32456 591 aaPredicted RBP21.33■■□□□ 1.01
DDR1-280ENST00000515881 ABCD1P33897 745 aa21.33■■□□□ 1.01
DDR1-280ENST00000515881 SLC39A14Q15043 492 aa21.33■■□□□ 1.01
DDR1-280ENST00000515881 KYAT1Q16773 422 aa21.33■■□□□ 1.01
DDR1-280ENST00000515881 RSPO2Q6UXX9 243 aaPredicted RBP21.33■■□□□ 1.01
DDR1-280ENST00000515881 KRI1Q8N9T8 703 aaKnown RBP21.33■■□□□ 1.01
DDR1-280ENST00000515881 SNX21Q969T3 373 aa21.33■■□□□ 1.01
DDR1-280ENST00000515881 TUBGCP4Q9UGJ1 667 aa21.33■■□□□ 1.01
DDR1-280ENST00000515881 NUB1Q9Y5A7 615 aa21.33■■□□□ 1.01
DDR1-280ENST00000515881 CDY1Q9Y6F8 540 aa21.33■■□□□ 1.01
DDR1-280ENST00000515881 TTC26A0AVF1 554 aa21.32■■□□□ 1
DDR1-280ENST00000515881 FAM189A1O60320 539 aa21.32■■□□□ 1
DDR1-280ENST00000515881 NMT1P30419 496 aaKnown RBP21.32■■□□□ 1
DDR1-280ENST00000515881 HOXA9P31269 272 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms