RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 MTHFD2P13995 350 aa5.43□□□□□ -1.54
LINC01088-211ENST00000515597 ALOX15P16050 662 aaPredicted RBP5.43□□□□□ -1.54
LINC01088-211ENST00000515597 OCA2Q04671 838 aa5.43□□□□□ -1.54
LINC01088-211ENST00000515597 ADRM1Q16186 407 aa5.43□□□□□ -1.54
LINC01088-211ENST00000515597 Q6ZVL8 140 aa5.43□□□□□ -1.54
LINC01088-211ENST00000515597 SPATS2Q86XZ4 545 aaKnown RBP5.43□□□□□ -1.54
LINC01088-211ENST00000515597 TMEM132CQ8N3T6 1108 aa5.43□□□□□ -1.54
LINC01088-211ENST00000515597 OR7D4Q8NG98 312 aa5.43□□□□□ -1.54
LINC01088-211ENST00000515597 TGFBRAP1Q8WUH2 860 aa5.43□□□□□ -1.54
LINC01088-211ENST00000515597 QRSL1Q9H0R6 528 aaKnown RBP5.43□□□□□ -1.54
LINC01088-211ENST00000515597 KIAA1586Q9HCI6 787 aa5.43□□□□□ -1.54
LINC01088-211ENST00000515597 NOX1Q9Y5S8 564 aa5.43□□□□□ -1.54
LINC01088-211ENST00000515597 ATRNL1Q5VV63 1379 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 K7ESF4 209 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 PRKD3O94806 890 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 POU3F3P20264 500 aaPredicted RBP5.42□□□□□ -1.54
LINC01088-211ENST00000515597 GPR3P46089 330 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 SCAND1P57086 179 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 SPDYE7PQ495Y7 208 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 ZNF362Q5T0B9 420 aaPredicted RBP5.42□□□□□ -1.54
LINC01088-211ENST00000515597 RNF219Q5W0B1 726 aaPredicted RBP5.42□□□□□ -1.54
LINC01088-211ENST00000515597 AFMIDQ63HM1 303 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 GLCCI1Q86VQ1 547 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 GPR156Q8NFN8 814 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 WDR66Q8TBY9 1149 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 FATE1Q969F0 183 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 AHCYL2Q96HN2 611 aaKnown RBP5.42□□□□□ -1.54
LINC01088-211ENST00000515597 NAF1Q96HR8 494 aaKnown RBP5.42□□□□□ -1.54
LINC01088-211ENST00000515597 FUBP3Q96I24 572 aaKnown RBP eCLIP5.42□□□□□ -1.54
LINC01088-211ENST00000515597 SPATA5L1Q9BVQ7 753 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 IFT122Q9HBG6 1241 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 C14orf119Q9NWQ9 140 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 SETD1BQ9UPS6 1966 aaKnown RBP5.42□□□□□ -1.54
LINC01088-211ENST00000515597 AATKQ6ZMQ8 1374 aa5.42□□□□□ -1.54
LINC01088-211ENST00000515597 A0A1B0GTW7 788 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 RAP2AP10114 183 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 CNGA1P29973 690 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 ECHS1P30084 290 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 ELLP55199 621 aaPredicted RBP5.41□□□□□ -1.54
LINC01088-211ENST00000515597 ERVK-21P61565 698 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 SIM1P81133 766 aaPredicted RBP5.41□□□□□ -1.54
LINC01088-211ENST00000515597 RRP12Q5JTH9 1297 aaKnown RBP5.41□□□□□ -1.54
LINC01088-211ENST00000515597 ARMC6Q6NXE6 501 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 CAGE1Q8TC20 777 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 UHRF1Q96T88 793 aaPredicted RBP5.41□□□□□ -1.54
LINC01088-211ENST00000515597 MRI1Q9BV20 369 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 DUSP26Q9BV47 211 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 FAM126AQ9BYI3 521 aaPredicted RBP5.41□□□□□ -1.54
LINC01088-211ENST00000515597 LDAHQ9H6V9 325 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 GREM2Q9H772 168 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 BCO1Q9HAY6 547 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 DMRT3Q9NQL9 472 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 USP25Q9UHP3 1055 aa5.41□□□□□ -1.54
LINC01088-211ENST00000515597 C1RP00736 705 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 FGFR4P22455 802 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 SLC6A2P23975 617 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 ATXN1P54253 815 aaKnown RBP5.4□□□□□ -1.54
LINC01088-211ENST00000515597 CXADRP78310 365 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 HSD11B2P80365 405 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 SRSF2Q01130 221 aaKnown RBP5.4□□□□□ -1.54
LINC01088-211ENST00000515597 ZNF169Q14929 603 aaPredicted RBP5.4□□□□□ -1.54
LINC01088-211ENST00000515597 TOR2AQ5JU69 321 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 FAM180AQ6UWF9 173 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 Q6ZNX1 250 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 ARHGEF25Q86VW2 580 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 DRC7Q8IY82 874 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 PQLC1Q8N2U9 271 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 STON2Q8WXE9 905 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 SLC9A6Q92581 669 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 HOXB13Q92826 284 aaPredicted RBP5.4□□□□□ -1.54
LINC01088-211ENST00000515597 ACE2Q9BYF1 805 aaPredicted RBP5.4□□□□□ -1.54
LINC01088-211ENST00000515597 RBM12Q9NTZ6 932 aaKnown RBP5.4□□□□□ -1.54
LINC01088-211ENST00000515597 CCM2LQ9NUG4 571 aaPredicted RBP5.4□□□□□ -1.54
LINC01088-211ENST00000515597 SIK3Q9Y2K2 1263 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 FRMD4BQ9Y2L6 1034 aa5.4□□□□□ -1.54
LINC01088-211ENST00000515597 PHLDB1Q86UU1 1377 aa5.4□□□□□ -1.55
LINC01088-211ENST00000515597 PRSS23O95084 383 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 IGLV2-14P01704 120 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 SREBF1P36956 1147 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 ALDH1A3P47895 512 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 MTNR1BP49286 362 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 SLC5A3P53794 718 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 PPP3CAQ08209 521 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 SP140Q13342 867 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 MUM1L1Q5H9M0 696 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 NELL1Q92832 810 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 REXO4Q9GZR2 422 aaKnown RBP5.39□□□□□ -1.55
LINC01088-211ENST00000515597 RNPEPQ9H4A4 650 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 CASS4Q9NQ75 786 aa5.39□□□□□ -1.55
LINC01088-211ENST00000515597 INO80B-WBP1J3KQ70 363 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 MATN4O95460 622 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 CDK4P11802 303 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 ATP5JP18859 108 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 FPR1P21462 350 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 MCAMP43121 646 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 PER3P56645 1201 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 MALLQ13021 153 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 ZNF529Q6P280 563 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 COG1Q8WTW3 980 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 NACC2Q96BF6 587 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms