RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ATF7IP2Q5U623 682 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 PDXDC1Q6P996 788 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 CRELD2Q6UXH1 353 aaPredicted RBP10.69□□□□□ -0.7
TPM3-221ENST00000513769 C15orf39Q6ZRI6 1047 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 IRF2BP2Q7Z5L9 587 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 RSPH3Q86UC2 560 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 CBWD2Q8IUF1 395 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 REXO1L1PQ8IX06 675 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 SPAG5Q96R06 1193 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 CHP1Q99653 195 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 FAM213AQ9BRX8 229 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 LSM14BQ9BX40 385 aaKnown RBP10.69□□□□□ -0.7
TPM3-221ENST00000513769 TMEM117Q9H0C3 514 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 GANQ9H2C0 597 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 FAM124BQ9H5Z6 455 aaPredicted RBP10.69□□□□□ -0.7
TPM3-221ENST00000513769 ASB7Q9H672 318 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 HAUS4Q9H6D7 363 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 RRAGDQ9NQL2 400 aaPredicted RBP10.69□□□□□ -0.7
TPM3-221ENST00000513769 SETD4Q9NVD3 440 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 RAB20Q9NX57 234 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 APEX2Q9UBZ4 518 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 AKT3Q9Y243 479 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 MGAMO43451 1857 aa10.69□□□□□ -0.7
TPM3-221ENST00000513769 KAT6AQ92794 2004 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 A0A087WZ62 844 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 C17orf102A2RUQ5 167 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 LRRC53A6NM62 1247 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 B4GALT4O60513 344 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 GPR32O75388 356 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 MYL3P08590 195 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 CLTAP09496 248 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 C6orf222P0C671 652 aaPredicted RBP10.68□□□□□ -0.7
TPM3-221ENST00000513769 ZNF286BP0CG31 522 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 EIF4BP23588 611 aaKnown RBP10.68□□□□□ -0.7
TPM3-221ENST00000513769 MATR3P43243 847 aaKnown RBP eCLIP10.68□□□□□ -0.7
TPM3-221ENST00000513769 KLK7P49862 253 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 CLCN3P51790 818 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 CRYBB1P53674 252 aaPredicted RBP10.68□□□□□ -0.7
TPM3-221ENST00000513769 MFAP3P55082 362 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 JAM2P57087 298 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 IGBP1P78318 339 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 PPP3CAQ08209 521 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 TUBB2AQ13885 445 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 PTPN21Q16825 1174 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 DUOXA2Q1HG44 320 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 ZACNQ401N2 412 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 CBWD6Q4V339 395 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 CBWD3Q5JTY5 395 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 DNTTIP2Q5QJE6 756 aaKnown RBP10.68□□□□□ -0.7
TPM3-221ENST00000513769 CBWD5Q5RIA9 395 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.68□□□□□ -0.7
TPM3-221ENST00000513769 SV2AQ7L0J3 742 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 RNF180Q86T96 592 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 VPS36Q86VN1 386 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 CCDC155Q8N6L0 562 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 TRPV1Q8NER1 839 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 RAET1EQ8TD07 263 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 LMBR1Q8WVP7 490 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 TRAPPC12Q8WVT3 735 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 DHX38Q92620 1227 aaKnown RBP10.68□□□□□ -0.7
TPM3-221ENST00000513769 TAF4BQ92750 862 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 CALR3Q96L12 384 aaKnown RBP10.68□□□□□ -0.7
TPM3-221ENST00000513769 NLRP4Q96MN2 994 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 FDXACB1Q9BRP7 624 aaPredicted RBP10.68□□□□□ -0.7
TPM3-221ENST00000513769 ADPGKQ9BRR6 497 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 CRACR2AQ9BSW2 395 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 TUBB2BQ9BVA1 445 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 ARHGAP39Q9C0H5 1083 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 IKZF4Q9H2S9 585 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 ADAMTS10Q9H324 1103 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 PLEKHA5Q9HAU0 1116 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 SIX2Q9NPC8 291 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 GCNT4Q9P109 453 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 CPSF3Q9UKF6 684 aaKnown RBP10.68□□□□□ -0.7
TPM3-221ENST00000513769 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.68□□□□□ -0.7
TPM3-221ENST00000513769 SQORQ9Y6N5 450 aa10.68□□□□□ -0.7
TPM3-221ENST00000513769 GOLGA8IPA6NC78 632 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 MOXD2PA6NHM9 499 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 GOLGA8JA6NMD2 632 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 LRRIQ3A6PVS8 624 aaPredicted RBP10.67□□□□□ -0.7
TPM3-221ENST00000513769 TISP43B9A030 160 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 RBAK-RBAKDNI3L0D1 243 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 ABLIM1O14639 778 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 KRT86O43790 486 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 CYP2C9P11712 490 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 CAPN2P17655 700 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 TNNI1P19237 187 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 SSTR3P32745 418 aaPredicted RBP10.67□□□□□ -0.7
TPM3-221ENST00000513769 GCLMP48507 274 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 MXI1P50539 228 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 BPIFB4P59827 614 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 ETF1P62495 437 aaKnown RBP10.67□□□□□ -0.7
TPM3-221ENST00000513769 DLG4P78352 724 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 MYL7Q01449 175 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 GCNT1Q02742 428 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 TRIM32Q13049 653 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 SGSM1Q2NKQ1 1148 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 ASTE1Q2TB18 679 aaPredicted RBP10.67□□□□□ -0.7
TPM3-221ENST00000513769 WDR44Q5JSH3 913 aa10.67□□□□□ -0.7
TPM3-221ENST00000513769 CCSAPQ6IQ19 270 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms