RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 CDT1Q9H211 546 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 FAM124BQ9H5Z6 455 aaPredicted RBP9.01□□□□□ -0.97
RNF4-220ENST00000513578 ASB7Q9H672 318 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 PTPRJQ12913 1337 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 TRIP11Q15643 1979 aa9.01□□□□□ -0.97
RNF4-220ENST00000513578 A0A087WZ62 844 aa9□□□□□ -0.97
RNF4-220ENST00000513578 A0A1B0GUA9 196 aa9□□□□□ -0.97
RNF4-220ENST00000513578 GRID2IPA4D2P6 1211 aa9□□□□□ -0.97
RNF4-220ENST00000513578 ENC1O14682 589 aa9□□□□□ -0.97
RNF4-220ENST00000513578 DUSP11O75319 330 aaKnown RBP9□□□□□ -0.97
RNF4-220ENST00000513578 SGPL1O95470 568 aa9□□□□□ -0.97
RNF4-220ENST00000513578 ASS1P00966 412 aaKnown RBP9□□□□□ -0.97
RNF4-220ENST00000513578 PNMA6AP0CW24 399 aaPredicted RBP9□□□□□ -0.97
RNF4-220ENST00000513578 AKR1A1P14550 325 aa9□□□□□ -0.97
RNF4-220ENST00000513578 CYP11B1P15538 503 aa9□□□□□ -0.97
RNF4-220ENST00000513578 H2AFXP16104 143 aaPredicted RBP9□□□□□ -0.97
RNF4-220ENST00000513578 ACO1P21399 889 aaKnown RBP9□□□□□ -0.97
RNF4-220ENST00000513578 PIK3CAP42336 1068 aa9□□□□□ -0.97
RNF4-220ENST00000513578 PSEN2P49810 448 aa9□□□□□ -0.97
RNF4-220ENST00000513578 FCGRTP55899 365 aa9□□□□□ -0.97
RNF4-220ENST00000513578 CHMP4BP1P59074 171 aa9□□□□□ -0.97
RNF4-220ENST00000513578 IGBP1P78318 339 aa9□□□□□ -0.97
RNF4-220ENST00000513578 CDR2Q01850 454 aa9□□□□□ -0.97
RNF4-220ENST00000513578 ENOX2Q16206 610 aaKnown RBP9□□□□□ -0.97
RNF4-220ENST00000513578 DUOXA2Q1HG44 320 aa9□□□□□ -0.97
RNF4-220ENST00000513578 SGSM1Q2NKQ1 1148 aa9□□□□□ -0.97
RNF4-220ENST00000513578 ERCC6LQ2NKX8 1250 aa9□□□□□ -0.97
RNF4-220ENST00000513578 ZNF568Q3ZCX4 644 aa9□□□□□ -0.97
RNF4-220ENST00000513578 EEF1DP3Q658K8 133 aa9□□□□□ -0.97
RNF4-220ENST00000513578 APBB1IPQ7Z5R6 666 aaPredicted RBP9□□□□□ -0.97
RNF4-220ENST00000513578 CD302Q8IX05 232 aa9□□□□□ -0.97
RNF4-220ENST00000513578 RHOT2Q8IXI1 618 aa9□□□□□ -0.97
RNF4-220ENST00000513578 PDCL2Q8N4E4 241 aa9□□□□□ -0.97
RNF4-220ENST00000513578 LRRC57Q8N9N7 239 aa9□□□□□ -0.97
RNF4-220ENST00000513578 MSANTD4Q8NCY6 345 aa9□□□□□ -0.97
RNF4-220ENST00000513578 LRRN4CLQ8ND94 238 aa9□□□□□ -0.97
RNF4-220ENST00000513578 TPCN2Q8NHX9 752 aa9□□□□□ -0.97
RNF4-220ENST00000513578 RFFLQ8WZ73 363 aa9□□□□□ -0.97
RNF4-220ENST00000513578 DDX1Q92499 740 aaKnown RBP9□□□□□ -0.97
RNF4-220ENST00000513578 TSC1Q92574 1164 aa9□□□□□ -0.97
RNF4-220ENST00000513578 KAT5Q92993 513 aa9□□□□□ -0.97
RNF4-220ENST00000513578 ABHD8Q96I13 439 aa9□□□□□ -0.97
RNF4-220ENST00000513578 FDXACB1Q9BRP7 624 aaPredicted RBP9□□□□□ -0.97
RNF4-220ENST00000513578 KATNAL1Q9BW62 490 aa9□□□□□ -0.97
RNF4-220ENST00000513578 TLR10Q9BXR5 811 aa9□□□□□ -0.97
RNF4-220ENST00000513578 CFHR5Q9BXR6 569 aa9□□□□□ -0.97
RNF4-220ENST00000513578 AP5M1Q9H0R1 490 aa9□□□□□ -0.97
RNF4-220ENST00000513578 UPF3AQ9H1J1 476 aaKnown RBP9□□□□□ -0.97
RNF4-220ENST00000513578 ADAMTS10Q9H324 1103 aa9□□□□□ -0.97
RNF4-220ENST00000513578 MINDY3Q9H8M7 445 aa9□□□□□ -0.97
RNF4-220ENST00000513578 ABCB6Q9NP58 842 aa9□□□□□ -0.97
RNF4-220ENST00000513578 AKT3Q9Y243 479 aa9□□□□□ -0.97
RNF4-220ENST00000513578 PCDHB2Q9Y5E7 798 aa9□□□□□ -0.97
RNF4-220ENST00000513578 GPR25O00155 361 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 CYP26A1O43174 497 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 BUB1O43683 1085 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 TSPAN1O60635 241 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 PALMO75781 387 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 STAU1O95793 577 aaKnown RBP8.99□□□□□ -0.97
RNF4-220ENST00000513578 GJB1P08034 283 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 IQCF3P0C7M6 154 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 SMIM10L2AP0DMW4 78 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 SMIM10L2BP0DMW5 78 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 CYP2B6P20813 491 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 AXLP30530 894 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 CYP2C19P33261 490 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 TNFSF9P41273 254 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 PDE6CP51160 858 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 GJA9P57773 515 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 FMO1Q01740 532 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 NOGQ13253 232 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 BIRC3Q13489 604 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 CUL2Q13617 745 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 NCOA4Q13772 614 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 MFSD10Q14728 455 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 NAA30Q147X3 362 aaPredicted RBP8.99□□□□□ -0.97
RNF4-220ENST00000513578 ELF2Q15723 593 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 CCL14Q16627 93 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 DCAF4L1Q3SXM0 396 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 PRAMEF19Q5SWL8 479 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 NFRKBQ6P4R8 1299 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 TRIM72Q6ZMU5 477 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 ZBTB33Q86T24 672 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 NOP9Q86U38 636 aaKnown RBP8.99□□□□□ -0.97
RNF4-220ENST00000513578 CREG2Q8IUH2 290 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 RPUSD2Q8IZ73 545 aaKnown RBP8.99□□□□□ -0.97
RNF4-220ENST00000513578 NME8Q8N427 588 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 OR5B17Q8NGF7 314 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 SLC20A1Q8WUM9 679 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 CTNNBL1Q8WYA6 563 aaPredicted RBP8.99□□□□□ -0.97
RNF4-220ENST00000513578 TSPAN18Q96SJ8 248 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 OSBPL9Q96SU4 736 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 IMPG2Q9BZV3 1241 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 PDZD7Q9H5P4 517 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 VRTNQ9H8Y1 702 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 RPF1Q9H9Y2 349 aaKnown RBP8.99□□□□□ -0.97
RNF4-220ENST00000513578 HDAC6Q9UBN7 1215 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 STXBP5LQ9Y2K9 1186 aa8.99□□□□□ -0.97
RNF4-220ENST00000513578 B4GALT5O43286 388 aa8.98□□□□□ -0.97
RNF4-220ENST00000513578 PHACTR2O75167 634 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms