RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ANHX	E9PGG2	379 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098		H3BQV1	296 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	GALR2	O43603	387 aa	Predicted RBP	13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TOM1L1	O75674	476 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	LAMP2	P13473	410 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	IGFBP6	P24592	240 aa	Predicted RBP	13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	RPL9	P32969	192 aa	Known RBP	13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TMEM119	Q4V9L6	283 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	MPZL3	Q6UWV2	235 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ZPBP2	Q6X784	338 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CEP57	Q86XR8	500 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SLC44A3	Q8N4M1	653 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	HASPIN	Q8TF76	798 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TBC1D32	Q96NH3	1257 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ACAP3	Q96P50	834 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	MYADM	Q96S97	322 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TARS2	Q9BW92	718 aa	Known RBP	13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PIDD1	Q9HB75	910 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CNTN3	Q9P232	1028 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	MTRR	Q9UBK8	725 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	VWA3A	A6NCI4	1184 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SFI1	A8K8P3	1242 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SLC16A4	O15374	487 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	BMP15	O95972	392 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PLA2G4B	P0C869	781 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	MAPT	P10636	758 aa	Known RBP	13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	NPR3	P17342	541 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	GBP2	P32456	591 aa	Predicted RBP	13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ZNF568	Q3ZCX4	644 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ARSH	Q5FYA8	562 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	LARP1B	Q659C4	914 aa	Known RBP	13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ANKS3	Q6ZW76	656 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TMEM105	Q8N8V8	129 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CEP120	Q8N960	986 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SNX27	Q96L92	541 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ZMAT2	Q96NC0	199 aa	Known RBP	13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TCHP	Q9BT92	498 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SMC3	Q9UQE7	1217 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CFAP54	Q96N23	3096 aa		13.75	□□□□□ -0.21
UBE2D3-231	ENST00000513098	WDR87	Q6ZQQ6	2873 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098		H0YCG3	227 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	MEFV	O15553	781 aa	Predicted RBP	13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ADAM12	O43184	909 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TBC1D4	O60343	1298 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	OR1D2	P34982	312 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SOX4	Q06945	474 aa	Predicted RBP	13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	MCL1	Q07820	350 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	STRN3	Q13033	797 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	MRPL58	Q14197	206 aa	Known RBP	13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	GLRA4	Q5JXX5	417 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	LIN9	Q5TKA1	542 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SLC8B1	Q6J4K2	584 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	BRAP	Q7Z569	592 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	GLYCTK	Q8IVS8	523 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	C3orf58	Q8NDZ4	430 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PLEKHA5	Q9HAU0	1116 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	LARS	Q9P2J5	1176 aa	Known RBP	13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ODF2L	Q9ULJ1	636 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	RIF1	Q5UIP0	2472 aa	Known RBP	13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CIT	O14578	2027 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	MYH11	P35749	1972 aa		13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PTPRZ1	P23471	2315 aa	Predicted RBP	13.74	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PROB1	E7EW31	1015 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SYN3	O14994	580 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	XYLB	O75191	536 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ABLIM3	O94929	683 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	C8A	P07357	584 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	MYB	P10242	640 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SRF	P11831	508 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	AOC1	P19801	751 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	FSHR	P23945	695 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	LONP1	P36776	959 aa	Known RBP	13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ZNF131	P52739	623 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	NCKAP1L	P55160	1127 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CUL4A	Q13619	759 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	HTR4	Q13639	388 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SLC10A6	Q3KNW5	377 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PPM1L	Q5SGD2	360 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ZNF461	Q8TAF7	563 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CDK5RAP3	Q96JB5	506 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ZBTB45	Q96K62	511 aa	Predicted RBP	13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TSPAN18	Q96SJ8	248 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	RTP3	Q9BQQ7	232 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	MFSD1	Q9H3U5	465 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	AVEN	Q9NQS1	362 aa	Predicted RBP	13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SLC2A4RG	Q9NR83	387 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	KCNH3	Q9ULD8	1083 aa		13.73	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ARHGEF37	A1IGU5	675 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PODXL	O00592	558 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CLDN3	O15551	220 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ADRB2	P07550	413 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TKT	P29401	623 aa	Known RBP	13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	UBA7	P41226	1012 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	OSTN	P61366	133 aa		13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ZRSR1	Q15695	479 aa	Known RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms