RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ATF7IP2Q5U623 682 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 KRT39Q6A163 491 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 PDXDC1Q6P996 788 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 TAS1R3Q7RTX0 852 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 SRGAP1Q7Z6B7 1085 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 KIAA1328Q86T90 577 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 RSPH3Q86UC2 560 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 CBWD2Q8IUF1 395 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 CCDC170Q8IYT3 715 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 C17orf53Q8N3J3 647 aaPredicted RBP8.75□□□□□ -1.01
HTT-209ENST00000512068 ZNF668Q96K58 619 aaPredicted RBP8.75□□□□□ -1.01
HTT-209ENST00000512068 FAM81BQ96LP2 452 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 PRIMPOLQ96LW4 560 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 C16orf45Q96MC5 204 aaPredicted RBP8.75□□□□□ -1.01
HTT-209ENST00000512068 PPP1R16BQ96T49 567 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 NFKBIZQ9BYH8 718 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 TTYH3Q9C0H2 523 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 INTS2Q9H0H0 1204 aaKnown RBP8.75□□□□□ -1.01
HTT-209ENST00000512068 FAM49AQ9H0Q0 323 aaPredicted RBP8.75□□□□□ -1.01
HTT-209ENST00000512068 TMEM8AQ9HCN3 771 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 XPNPEP3Q9NQH7 507 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 AGPAT5Q9NUQ2 364 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 SPTLC3Q9NUV7 552 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 SETD4Q9NVD3 440 aa8.75□□□□□ -1.01
HTT-209ENST00000512068 A0A087WZ62 844 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 SMIM35A0A1B0GVV1 85 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 ERVH48-1M5A8F1 160 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 GPR25O00155 361 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 OGTO15294 1046 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 AKR1B10O60218 316 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 MSCO60682 206 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 PHACTR2O75167 634 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 SERPING1P05155 500 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 RPLP2P05387 115 aaKnown RBP8.74□□□□□ -1.01
HTT-209ENST00000512068 ADRB2P07550 413 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 UCHL3P15374 230 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 SLC9A1P19634 815 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 PON1P27169 355 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 ADSSP30520 456 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 STAT1P42224 750 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 GCLMP48507 274 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 AP3M2P53677 418 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 GJA9P57773 515 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 NLRP11P59045 1033 aaKnown RBP8.74□□□□□ -1.01
HTT-209ENST00000512068 CDK17Q00537 523 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 CACNB2Q08289 660 aaPredicted RBP8.74□□□□□ -1.01
HTT-209ENST00000512068 KLHL30Q0D2K2 578 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 KCNMA1Q12791 1236 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 BIRC3Q13489 604 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 PCBP1Q15365 356 aaKnown RBP eCLIP8.74□□□□□ -1.01
HTT-209ENST00000512068 ARHGAP29Q52LW3 1261 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 FAM47CQ5HY64 1035 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 WDR44Q5JSH3 913 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 KLHDC7AQ5VTJ3 777 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 SLC39A4Q6P5W5 647 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 TRIM65Q6PJ69 517 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 MPZL3Q6UWV2 235 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 RNF180Q86T96 592 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 CCDC116Q8IYX3 515 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 PCSK9Q8NBP7 692 aaKnown RBP8.74□□□□□ -1.01
HTT-209ENST00000512068 LMBR1Q8WVP7 490 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 SYN2Q92777 582 aaPredicted RBP8.74□□□□□ -1.01
HTT-209ENST00000512068 BORCS6Q96GS4 357 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 PPP1R13BQ96KQ4 1090 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 MFSD14AQ96MC6 490 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 FBXL18Q96ME1 805 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 ACO2Q99798 780 aaKnown RBP8.74□□□□□ -1.01
HTT-209ENST00000512068 FDXACB1Q9BRP7 624 aaPredicted RBP8.74□□□□□ -1.01
HTT-209ENST00000512068 IMPG2Q9BZV3 1241 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 CCDC113Q9H0I3 377 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 SAGE1Q9NXZ1 904 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 FBXL5Q9UKA1 691 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 MYO6Q9UM54 1294 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 DOLKQ9UPQ8 538 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 GINS2Q9Y248 185 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 PPP2R2CQ9Y2T4 447 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 R3HCC1Q9Y3T6 440 aaKnown RBP8.74□□□□□ -1.01
HTT-209ENST00000512068 BZW2Q9Y6E2 419 aaKnown RBP8.74□□□□□ -1.01
HTT-209ENST00000512068 STYXL1Q9Y6J8 313 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 WASF2Q9Y6W5 498 aa8.74□□□□□ -1.01
HTT-209ENST00000512068 A0A0B4J269 797 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 LRRIQ3A6PVS8 624 aaPredicted RBP8.73□□□□□ -1.01
HTT-209ENST00000512068 J3QL48 77 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 PMM2O15305 246 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 PGK1P00558 417 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 TNNC2P02585 160 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 GJB1P08034 283 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 ACTN1P12814 892 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 TNNT1P13805 278 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 ELNP15502 786 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 FERP16591 822 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 PIK3CAP42336 1068 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 ACOT2P49753 483 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 GPC3P51654 580 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 RAB15P59190 212 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 PURAQ00577 322 aaKnown RBP8.73□□□□□ -1.01
HTT-209ENST00000512068 MAP2K1Q02750 393 aaPredicted RBP8.73□□□□□ -1.01
HTT-209ENST00000512068 ARID5AQ03989 594 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 MBTD1Q05BQ5 628 aa8.73□□□□□ -1.01
HTT-209ENST00000512068 MCL1Q07820 350 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms