RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 FAM81BQ96LP2 452 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 FBXL18Q96ME1 805 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 GRHL1Q9NZI5 618 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 GMNCA6NCL1 334 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 SPDYE16A6NNV3 312 aaPredicted RBP11.73□□□□□ -0.53
SEC31A-228ENST00000509142 FZD9O00144 591 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 PHF2O75151 1096 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 CALCAP01258 141 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 PTGIRP43119 386 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 RTP1P59025 263 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 PPP2R2AP63151 447 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 CNTN2Q02246 1040 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 YTHDF3Q7Z739 585 aaKnown RBP11.73□□□□□ -0.53
SEC31A-228ENST00000509142 ANAPC7Q9UJX3 599 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 PTPN22Q9Y2R2 807 aa11.73□□□□□ -0.53
SEC31A-228ENST00000509142 BPIFB4P59827 614 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 MKRN4PQ13434 485 aaPredicted RBP11.72□□□□□ -0.53
SEC31A-228ENST00000509142 CCDC137Q6PK04 289 aaKnown RBP11.72□□□□□ -0.53
SEC31A-228ENST00000509142 FBXO25Q8TCJ0 367 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 MTRF1LQ9UGC7 380 aaKnown RBP11.72□□□□□ -0.53
SEC31A-228ENST00000509142 ZNF541Q9H0D2 1346 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 KIAA0391O15091 583 aaKnown RBP11.72□□□□□ -0.53
SEC31A-228ENST00000509142 HLA-DRAP01903 254 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 OATP04181 439 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 PYGMP11217 842 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 SSR1P43307 286 aaKnown RBP11.72□□□□□ -0.53
SEC31A-228ENST00000509142 NSFP46459 744 aaKnown RBP11.72□□□□□ -0.53
SEC31A-228ENST00000509142 NCAPG2Q86XI2 1143 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 PRELID2Q8N945 189 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 MSTO1Q9BUK6 570 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 NRBP2Q9NSY0 501 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 ARHGAP28Q9P2N2 729 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 STBD1O95210 358 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 PAEPP09466 180 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 GCNT1Q02742 428 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 PPP1R7Q15435 360 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 AGBL2Q5U5Z8 902 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 SLFN12LQ6IEE8 588 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 EEPD1Q7L9B9 569 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 CCDC13Q8IYE1 715 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 CPA5Q8WXQ8 436 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 RBAKQ9NYW8 714 aaPredicted RBP11.72□□□□□ -0.53
SEC31A-228ENST00000509142 ADAMTS5Q9UNA0 930 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 PCDHB4Q9Y5E5 795 aa11.72□□□□□ -0.53
SEC31A-228ENST00000509142 PODXLO00592 558 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 GGPS1O95749 300 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 CYP1A2P05177 515 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 SCP2P22307 547 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 NLRP11P59045 1033 aaKnown RBP11.71□□□□□ -0.53
SEC31A-228ENST00000509142 ACTN3Q08043 901 aaPredicted RBP11.71□□□□□ -0.53
SEC31A-228ENST00000509142 CHST13Q8NET6 341 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 TARS2Q9BW92 718 aaKnown RBP11.71□□□□□ -0.53
SEC31A-228ENST00000509142 PCDHB2Q9Y5E7 798 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 TLDC2A0PJX2 215 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 C5orf60A6NFR6 353 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 ATP2A1O14983 1001 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 TP73O15350 636 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 ZC3H11AO75152 810 aaKnown RBP eCLIP11.71□□□□□ -0.533e-10■■■□□ 18.9
SEC31A-228ENST00000509142 CDR1P51861 262 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 SP2Q02086 613 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 ZFYVE27Q5T4F4 411 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 FAM212AQ96EL1 285 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 ZBTB45Q96K62 511 aaPredicted RBP11.71□□□□□ -0.53
SEC31A-228ENST00000509142 IMPG2Q9BZV3 1241 aa11.71□□□□□ -0.53
SEC31A-228ENST00000509142 ZNFX1Q9P2E3 1918 aaKnown RBP11.71□□□□□ -0.54
SEC31A-228ENST00000509142 PEX10O60683 326 aa11.71□□□□□ -0.54
SEC31A-228ENST00000509142 PEX5P50542 639 aa11.71□□□□□ -0.54
SEC31A-228ENST00000509142 GTF2A1P52655 376 aaPredicted RBP11.71□□□□□ -0.54
SEC31A-228ENST00000509142 IFI35P80217 286 aaPredicted RBP11.71□□□□□ -0.54
SEC31A-228ENST00000509142 SF3A3Q12874 501 aaKnown RBP eCLIP11.71□□□□□ -0.548e-7■■□□□ 14.1
SEC31A-228ENST00000509142 CLEC16AQ2KHT3 1053 aa11.71□□□□□ -0.54
SEC31A-228ENST00000509142 RNF187Q5TA31 235 aaPredicted RBP11.71□□□□□ -0.54
SEC31A-228ENST00000509142 SPOPLQ6IQ16 392 aa11.71□□□□□ -0.54
SEC31A-228ENST00000509142 GADL1Q6ZQY3 521 aa11.71□□□□□ -0.54
SEC31A-228ENST00000509142 TAS1R3Q7RTX0 852 aa11.71□□□□□ -0.54
SEC31A-228ENST00000509142 SLC13A5Q86YT5 568 aaPredicted RBP11.71□□□□□ -0.54
SEC31A-228ENST00000509142 PDLIM7Q9NR12 457 aa11.71□□□□□ -0.54
SEC31A-228ENST00000509142 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.71□□□□□ -0.54
SEC31A-228ENST00000509142 SRRM3A6NNA2 597 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-228ENST00000509142 RASSF9O75901 435 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 MTA2O94776 668 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 LDHAP00338 332 aaKnown RBP11.7□□□□□ -0.54
SEC31A-228ENST00000509142 RPL21P46778 160 aaKnown RBP11.7□□□□□ -0.54
SEC31A-228ENST00000509142 PSMD6Q15008 389 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 TCEAL1Q15170 157 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 LIN9Q5TKA1 542 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 TMEM270Q6UE05 265 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 DNERQ8NFT8 737 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 ASAP3Q8TDY4 903 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 PSPC1Q8WXF1 523 aaKnown RBP11.7□□□□□ -0.54
SEC31A-228ENST00000509142 SEC16BQ96JE7 1060 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 JPH2Q9BR39 696 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-228ENST00000509142 SEMA4AQ9H3S1 761 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.7□□□□□ -0.54
SEC31A-228ENST00000509142 PARP2Q9UGN5 583 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 CSADQ9Y600 493 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 SMIM23A6NLE4 172 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 DRD4P21917 467 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 NAMPTP43490 491 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 CALCOCO2Q13137 446 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms