RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SENP3-EIF4A1A0A087X0R7 540 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 ARHGAP10A1A4S6 786 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 EME2A4GXA9 379 aaPredicted RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 C2orf81A6NN90 581 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 UBXN8O00124 270 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 PPP6R2O75170 966 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 MICAL2O94851 1124 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 LAMB3Q13751 1172 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 PTPRNQ16849 979 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 KIAA0319Q5VV43 1072 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 METTL23Q86XA0 190 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 SIRT2Q8IXJ6 389 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 LRTOMTQ8WZ04 291 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 USP26Q9BXU7 913 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 TNMDQ9H2S6 317 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 SEC63Q9UGP8 760 aaKnown RBP4.19□□□□□ -1.74
NEDD4-209ENST00000508871 UBR3Q6ZT12 1888 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 BRWD3Q6RI45 1802 aa4.19□□□□□ -1.74
NEDD4-209ENST00000508871 ZNF891A8MT65 544 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 BHMG1C9JSJ3 638 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 EBAG9O00559 213 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 AQP7O14520 342 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 KITP10721 976 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 JUNDP17535 347 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 MBTPS1Q14703 1052 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 RRAGBQ5VZM2 374 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 R3HCC1LQ7Z5L2 792 aaKnown RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 POMGNT1Q8WZA1 660 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 TBC1D32Q96NH3 1257 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 POLR3CQ9BUI4 534 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 SORBS1Q9BX66 1292 aaKnown RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 NT5C1AQ9BXI3 368 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 BHMT2Q9H2M3 363 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ITM2CQ9NQX7 267 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 TMOD3Q9NYL9 352 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 JRKLQ9Y4A0 524 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 BLACEA4D250 179 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 KLF4O43474 513 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CLEC3AO75596 197 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 RAD17O75943 681 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ERLIN2O94905 339 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CTSHP09668 335 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 EIF2AK2P19525 551 aaKnown RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 PHKA1P46020 1223 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ITGA8P53708 1063 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 SIM2Q14190 667 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 LPCAT2Q7L5N7 544 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 G2E3Q7L622 706 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 APLFQ8IW19 511 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ZSCAN18Q8TBC5 510 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CNKSR1Q969H4 720 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ACAP3Q96P50 834 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 RAB3IPQ96QF0 476 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 SPSB2Q99619 263 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 GPATCH1Q9BRR8 931 aaKnown RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 RTFDC1Q9BY42 306 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 NCOA5Q9HCD5 579 aaKnown RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 SPATS2LQ9NUQ6 558 aaKnown RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ATP11BQ9Y2G3 1177 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 MYH13Q9UKX3 1938 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 HIP1O00291 1037 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 PSMD14O00487 310 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 PPEF1O14829 653 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 GPR39O43194 453 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 DHRS4L1P0CG22 281 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 NCF2P19878 526 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 PPM1AP35813 382 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 NRLP54845 237 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 KCNC4Q03721 635 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 SURF1Q15526 300 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 RTN1Q16799 776 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 USH1GQ495M9 461 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ZNF569Q5MCW4 686 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 C6orf163Q5TEZ5 329 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 KLHDC7AQ5VTJ3 777 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 KRT73Q86Y46 540 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 STX12Q86Y82 276 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 EPHX4Q8IUS5 362 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 RHOT1Q8IXI2 618 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CARNMT1Q8N4J0 409 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CCDC148Q8NFR7 591 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 SUN5Q8TC36 379 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 BRF1Q92994 677 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 SH3KBP1Q96B97 665 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 SH3GL1Q99961 368 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 TUBA1CQ9BQE3 449 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CORO1BQ9BR76 489 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 EMILIN2Q9BXX0 1053 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ANO3Q9BYT9 981 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 SLC5A7Q9GZV3 580 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 TTC12Q9H892 705 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CHODLQ9H9P2 273 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 GPR108Q9NPR9 543 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 NKIRAS2Q9NYR9 191 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ARPP21Q9UBL0 812 aaPredicted RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 MAP3K2Q9Y2U5 619 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 DDX49Q9Y6V7 483 aaKnown RBP4.18□□□□□ -1.74
NEDD4-209ENST00000508871 DLEC1Q9Y238 1755 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 CCDC169A6NNP5 214 aa4.18□□□□□ -1.74
NEDD4-209ENST00000508871 ERVV-1B6SEH8 477 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms