RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 EXOSC10Q01780 885 aaKnown RBP4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 SEPT2Q15019 361 aa4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 MFSD14BQ5SR56 506 aa4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 DACT2Q5SW24 774 aa4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 HECTD2Q5U5R9 776 aa4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 SYCE2Q6PIF2 218 aa4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 MDM1Q8TC05 714 aa4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 JADE3Q92613 823 aa4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 FUBP1Q96AE4 644 aaKnown RBP4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 CEP95Q96GE4 821 aa4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 FUBP3Q96I24 572 aaKnown RBP eCLIP4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 MKS1Q9NXB0 559 aa4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 SIK3Q9Y2K2 1263 aa4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 HS3ST4Q9Y661 456 aa4.16□□□□□ -1.74
AC008539.1-201ENST00000507653 ANKRD62A6NC57 917 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 MARCH11A6NNE9 402 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 CXorf49A8MYA2 514 aaPredicted RBP4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 MASP2O00187 686 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 PCDHGA12O60330 932 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 NDUFS2O75306 463 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 OSMP13725 252 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 GSPT1P15170 499 aaKnown RBP4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 ZSCAN20P17040 1043 aaPredicted RBP4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 BMPR1AP36894 532 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 ITKQ08881 620 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 MTM1Q13496 603 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 METRNLQ641Q3 311 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 EFCAB12Q6NXP0 572 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 PGM2L1Q6PCE3 622 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 GDF7Q7Z4P5 450 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 VRK3Q8IV63 474 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 FAM177A1Q8N128 213 aaPredicted RBP4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 PQLC1Q8N2U9 271 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 CAVIN3Q969G5 261 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 COQ10AQ96MF6 247 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 SPON1Q9HCB6 807 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 HOMER2Q9NSB8 354 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 TMEM140Q9NV12 185 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 TRPM5Q9NZQ8 1165 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 DKK2Q9UBU2 259 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 TUBD1Q9UJT1 453 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 IPPQ9Y573 584 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 PCDHGA9Q9Y5G4 932 aaKnown RBP4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 PCDHGA8Q9Y5G5 932 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 PCDHGA7Q9Y5G6 932 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 PCDHGA6Q9Y5G7 932 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 PCDHGA3Q9Y5H0 932 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 PCDHGA2Q9Y5H1 932 aa4.15□□□□□ -1.75
AC008539.1-201ENST00000507653 TMEM200CA6NKL6 621 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 KATNA1O75449 491 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 HKR1P10072 659 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 C5AR1P21730 350 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 ADSLP30566 484 aaPredicted RBP4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 CDC42EP1Q00587 391 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 GUCY1B3Q02153 619 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 FAM102AQ5T9C2 384 aaPredicted RBP4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 AGAP9Q5VTM2 703 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 PPP4R3AQ6IN85 833 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 MIGA2Q7L4E1 593 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 PRIMA1Q86XR5 153 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 ADGRG3Q86Y34 549 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 RHOT2Q8IXI1 618 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 OR10H5Q8NGA6 315 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 TFAP2CQ92754 450 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 GPATCH3Q96I76 525 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 NUP88Q99567 741 aaPredicted RBP4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 C7orf25Q9BPX7 421 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 MLST8Q9BVC4 326 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 REXO4Q9GZR2 422 aaKnown RBP4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 DMRT3Q9NQL9 472 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 ADARB2Q9NS39 739 aaKnown RBP4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 CALCOCO1Q9P1Z2 691 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 POGKQ9P215 609 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 INSL6Q9Y581 213 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 CFAP20Q9Y6A4 193 aaKnown RBP4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 TNKSO95271 1327 aa4.14□□□□□ -1.75
AC008539.1-201ENST00000507653 AHRRA9YTQ3 701 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 GPR32O75388 356 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 RPLP2P05387 115 aaKnown RBP4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 CDK4P11802 303 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 ALAS1P13196 640 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 VCAM1P19320 739 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 PTPN7P35236 360 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 RECQLP46063 649 aaPredicted RBP4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 FXR1P51114 621 aaKnown RBP eCLIP4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 PER3P56645 1201 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 CTXN1P60606 82 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 RAB39AQ14964 217 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 NOMO1Q15155 1222 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 ATP2B3Q16720 1220 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 SPDYE7PQ495Y7 208 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 ATXN7L2Q5T6C5 722 aaPredicted RBP4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 ABHD17BQ5VST6 288 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 ANKS6Q68DC2 871 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 SYT12Q8IV01 421 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 ARHGEF19Q8IW93 802 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 OR2I1PQ8NGU4 316 aa4.13□□□□□ -1.75
AC008539.1-201ENST00000507653 SLC35B2Q8TB61 432 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms