RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 MTRRQ9UBK8 725 aa15.79■□□□□ 0.12
HMGCS1-203ENST00000507004 C5orf42Q9H799 3197 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 H7C4K7 107 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 SLC16A4O15374 487 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 CLDN3O15551 220 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 XPOTO43592 962 aaKnown RBP15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 C8AP07357 584 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 CLCNKBP51801 687 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 NOLC1Q14978 699 aaKnown RBP eCLIP15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 GLRA4Q5JXX5 417 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 KCNK18Q7Z418 384 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 TMEM161BQ8NDZ6 487 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 HASPINQ8TF76 798 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 RABGGTAQ92696 567 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 SNX27Q96L92 541 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 POLD4Q9HCU8 107 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 WNT16Q9UBV4 365 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 USP20Q9Y2K6 914 aa15.78■□□□□ 0.12
HMGCS1-203ENST00000507004 C2orf16Q68DN1 1984 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 SPATA31D3P0C874 917 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 MAPTP10636 758 aaKnown RBP15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 RPL17P18621 184 aaKnown RBP15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 PAX3P23760 479 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 ASTLQ6HA08 431 aaPredicted RBP15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 SPATA31D4Q6ZUB0 917 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 TAS1R3Q7RTX0 852 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 GLYCTKQ8IVS8 523 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 PRSS33Q8NF86 280 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 RASSF8Q8NHQ8 419 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 RTP3Q9BQQ7 232 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 OXCT2Q9BYC2 517 aaPredicted RBP15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 FBXL21Q9UKT6 434 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 KCNH3Q9ULD8 1083 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 MAFFQ9ULX9 164 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 NUB1Q9Y5A7 615 aa15.77■□□□□ 0.12
HMGCS1-203ENST00000507004 PLXNA3P51805 1871 aa15.77■□□□□ 0.11
HMGCS1-203ENST00000507004 PODXLO00592 558 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 ABLIM1O14639 778 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 GALR2O43603 387 aaPredicted RBP15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 CLTAP09496 248 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 SRFP11831 508 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 LAMP2P13473 410 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 FSHRP23945 695 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 ELF1P32519 619 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 OR1D2P34982 312 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 MRE11P49959 708 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 VCPP55072 806 aaKnown RBP15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 NCKAP1LP55160 1127 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 MCL1Q07820 350 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 CUL4AQ13619 759 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 MTSS1LQ765P7 747 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 ALYREFQ86V81 257 aaKnown RBP15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 CEP120Q8N960 986 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 APPL2Q8NEU8 664 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 PARVGQ9HBI0 331 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 CACNG4Q9UBN1 327 aa15.76■□□□□ 0.11
HMGCS1-203ENST00000507004 SFI1A8K8P3 1242 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 FAM13AO94988 1023 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 CD2BP2O95400 341 aaKnown RBP15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 KRT18P05783 430 aaKnown RBP15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 CYP3A5P20815 502 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 MATR3P43243 847 aaKnown RBP eCLIP15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 OSTNP61366 133 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 TCF15Q12870 199 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 AXDND1Q5T1B0 1012 aaPredicted RBP15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 IER5LQ5T953 404 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 SLC8B1Q6J4K2 584 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 GET4Q7L5D6 327 aaPredicted RBP15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 HAUS6Q7Z4H7 955 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 CD302Q8IX05 232 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 ZNF461Q8TAF7 563 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 BICD1Q96G01 975 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 CCSER1Q9C0I3 900 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 ANKFY1Q9P2R3 1169 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 CCDC39Q9UFE4 941 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 CDH7Q9ULB5 785 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 CDY1Q9Y6F8 540 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 KMT2EQ8IZD2 1858 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 CITO14578 2027 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 MYH11P35749 1972 aa15.75■□□□□ 0.11
HMGCS1-203ENST00000507004 CACNA1HO95180 2353 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 ARHGEF37A1IGU5 675 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 ANHXE9PGG2 379 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 TBCAO75347 108 aaKnown RBP15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 PIGRP01833 764 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 HARSP12081 509 aaKnown RBP15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 AOC1P19801 751 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 TXLNAP40222 546 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 LIG4P49917 911 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 ZNF131P52739 623 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 SF3A1Q15459 793 aaKnown RBP15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 TPGS2Q68CL5 300 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 GPBP1Q86WP2 473 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 SLC44A3Q8N4M1 653 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 SLC7A14Q8TBB6 771 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 INTS4Q96HW7 963 aaKnown RBP15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 MYADMQ96S97 322 aa15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 AVENQ9NQS1 362 aaPredicted RBP15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 UBQLN1Q9UMX0 589 aaKnown RBP15.74■□□□□ 0.11
HMGCS1-203ENST00000507004 HNRNPDLO14979 420 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms