RNA–Protein interactions for RNA: ENST00000506466.5

ATXN3-209, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-209ENST00000506466 RRAGDQ9NQL2 400 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-209ENST00000506466 SRRDQ9UH36 339 aa5.65□□□□□ -1.5
ATXN3-209ENST00000506466 USP18Q9UMW8 372 aa5.65□□□□□ -1.5
ATXN3-209ENST00000506466 RRP7AQ9Y3A4 280 aaKnown RBP5.65□□□□□ -1.5
ATXN3-209ENST00000506466 METP08581 1390 aa5.65□□□□□ -1.51
ATXN3-209ENST00000506466 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-209ENST00000506466 GRXCR1A8MXD5 290 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 EYA4O95677 639 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 PEX11BO96011 259 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 HSP90AA1P07900 732 aaKnown RBP5.64□□□□□ -1.51
ATXN3-209ENST00000506466 TPM2P07951 284 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 KLF10Q13118 480 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 TOB2Q14106 344 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-209ENST00000506466 LSM12Q3MHD2 195 aaKnown RBP5.64□□□□□ -1.51
ATXN3-209ENST00000506466 ALDH1L2Q3SY69 923 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 KRT40Q6A162 431 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 ATF7IPQ6VMQ6 1270 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 DDX46Q7L014 1031 aaKnown RBP5.64□□□□□ -1.51
ATXN3-209ENST00000506466 LILRA3Q8N6C8 439 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-209ENST00000506466 AMER2Q8N7J2 671 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 ANP32BQ92688 251 aaKnown RBP5.64□□□□□ -1.51
ATXN3-209ENST00000506466 TRIM44Q96DX7 344 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-209ENST00000506466 CAAP1Q9H8G2 361 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 GRPEL1Q9HAV7 217 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 TOPORSQ9NS56 1045 aaPredicted RBP5.64□□□□□ -1.51
ATXN3-209ENST00000506466 SMC4Q9NTJ3 1288 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 TERF2IPQ9NYB0 399 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 HS3ST3A1Q9Y663 406 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 PNPLA6Q8IY17 1366 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 TNRQ92752 1358 aa5.64□□□□□ -1.51
ATXN3-209ENST00000506466 NRP1O14786 923 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 HOXA3O43365 443 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 NRP2O60462 931 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 TMEM127O75204 238 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 HSP90AB1P08238 724 aaKnown RBP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 VIL1P09327 827 aaKnown RBP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 U2AF1L5P0DN76 240 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 DDIT3P35638 169 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 MAN2A2P49641 1150 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 NPEPPSP55786 919 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 WNT3AP56704 352 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 U2AF1Q01081 240 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 NUCB1Q02818 461 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 BMP2KLQ5H9B9 411 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 METTL24Q5JXM2 366 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 HDGFL2Q7Z4V5 671 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 APBB1IPQ7Z5R6 666 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 ITPRIPQ8IWB1 547 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 ZFPM1Q8IX07 1006 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 ELOA2Q8IYF1 753 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 OR14C36Q8NHC7 312 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 USP7Q93009 1102 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 GCC1Q96CN9 775 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 ORAI2Q96SN7 254 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 MNTQ99583 582 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 TTC1Q99614 292 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 PDCD2LQ9BRP1 358 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 APOBEC2Q9Y235 224 aaKnown RBP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 TMA7Q9Y2S6 64 aaKnown RBP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 CDY2AQ9Y6F7 541 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 IBTKQ9P2D0 1353 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 TECPR2O15040 1411 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 CPSF1Q10570 1443 aaKnown RBP5.63□□□□□ -1.51
ATXN3-209ENST00000506466 ATP7BP35670 1465 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 CDC42BPGQ6DT37 1551 aa5.63□□□□□ -1.51
ATXN3-209ENST00000506466 KNDC1Q76NI1 1749 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 KIF20BQ96Q89 1820 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 ULK1O75385 1050 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 CLEC2LP0C7M8 214 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 TRIM27P14373 513 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 TMPOP42166 694 aaKnown RBP5.62□□□□□ -1.51
ATXN3-209ENST00000506466 SESN3P58005 492 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 MEF2AQ02078 507 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-209ENST00000506466 CALD1Q05682 793 aaKnown RBP5.62□□□□□ -1.51
ATXN3-209ENST00000506466 PPARAQ07869 468 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 CCDC173Q0VFZ6 552 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 MRPL49Q13405 166 aaKnown RBP5.62□□□□□ -1.51
ATXN3-209ENST00000506466 TUBA3CQ13748 450 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 UBE3CQ15386 1083 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 FSCN1Q16658 493 aaKnown RBP5.62□□□□□ -1.51
ATXN3-209ENST00000506466 C19orf54Q5BKX5 351 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 DCAF17Q5H9S7 520 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-209ENST00000506466 TUBA3EQ6PEY2 450 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 CLEC17AQ6ZS10 378 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 UBR7Q8N806 425 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 ZNF341Q9BYN7 854 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 TRPS1Q9UHF7 1281 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 ING1Q9UK53 422 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-209ENST00000506466 TNNQ9UQP3 1299 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 NOC2LQ9Y3T9 749 aaKnown RBP5.62□□□□□ -1.51
ATXN3-209ENST00000506466 FAM135BQ49AJ0 1406 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 CPS1P31327 1500 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 UBR1Q8IWV7 1749 aa5.62□□□□□ -1.51
ATXN3-209ENST00000506466 MFAP3LO75121 409 aa5.61□□□□□ -1.51
ATXN3-209ENST00000506466 IPO13O94829 963 aaKnown RBP5.61□□□□□ -1.51
ATXN3-209ENST00000506466 ZNF202O95125 648 aa5.61□□□□□ -1.51
ATXN3-209ENST00000506466 LTA4HP09960 611 aaKnown RBP5.61□□□□□ -1.51
ATXN3-209ENST00000506466 POU3F3P20264 500 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-209ENST00000506466 TERF1P54274 439 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms