RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 ATP2A2P16615 1042 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 ATF6P18850 670 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 SFPQP23246 707 aaKnown RBP eCLIP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 CTNNA1P35221 906 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 PHBP35232 272 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 PTGS2P35354 604 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 ATP6V1E1P36543 226 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 SLC1A1P43005 524 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 ATP8B2P98198 1209 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 KDSRQ06136 332 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 EXOSC9Q06265 439 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 MCL1Q07820 350 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 TEFQ10587 303 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 TRIM32Q13049 653 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 DCTN2Q13561 401 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 ITGA9Q13797 1035 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 NFIXQ14938 502 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 C6orf183Q5T699 404 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 SNRNP48Q6IEG0 339 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 OR7E24Q6IFN5 339 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 PHLDB3Q6NSJ2 640 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 TMEM214Q6NUQ4 689 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 WDR93Q6P2C0 686 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 FAM171BQ6P995 826 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 ZNF790Q6PG37 636 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 RFPL4BQ6ZWI9 263 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 RHOUQ7L0Q8 258 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 DHX32Q7L7V1 743 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 CACNA2D4Q7Z3S7 1137 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 AKAP14Q86UN6 197 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 STK32CQ86UX6 486 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 GATAD2AQ86YP4 633 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 PALM2Q8IXS6 379 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 TRMT2AQ8IZ69 625 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 NOA1Q8NC60 698 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 SUPT20HQ8NEM7 779 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 FNDC8Q8TC99 324 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 E2F7Q96AV8 911 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 KCTD12Q96CX2 325 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 IQCDQ96DY2 449 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 RRP36Q96EU6 259 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 METTL2AQ96IZ6 378 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 CNDP1Q96KN2 507 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 CDRT15Q96T59 188 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 SYT15Q9BQS2 421 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 CCDC77Q9BR77 488 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 EDEM3Q9BZQ6 932 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 ZNF700Q9H0M5 742 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 NDST4Q9H3R1 872 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 PTPRHQ9HD43 1115 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 WASH6PQ9NQA3 447 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 SH2B1Q9NRF2 756 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 TAS2R7Q9NYW3 318 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 C9orf78Q9NZ63 289 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 HACD3Q9P035 362 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 PIM2Q9P1W9 311 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 FNIP2Q9P278 1114 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 HSFX1Q9UBD0 423 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 MALT1Q9UDY8 824 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 KCNN3Q9UGI6 736 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 RABGEF1Q9UJ41 708 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 FBXO10Q9UK96 956 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 DNM3Q9UQ16 869 aa6.92□□□□□ -1.3
CLCN3-203ENST00000502998 GNEQ9Y223 722 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 AFDNP55196 1824 aaKnown RBP6.92□□□□□ -1.3
CLCN3-203ENST00000502998 NRXN2Q9P2S2 1712 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 GOLGA8QA0A0J9YX86 632 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 C1orf232A0A0U1RR37 186 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 WDR91A4D1P6 747 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 GOLGA8OA6NCC3 632 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 MAGEA13PA6NCF6 341 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 CCDC69A6NI79 296 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 GOLGA8NF8WBI6 632 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 VWA5AO00534 786 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 FBP2O00757 339 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 IRS4O14654 1257 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 TOR1BO14657 336 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 ZBTB43O43298 467 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 KCNQ3O43525 872 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 STARD3NLO95772 234 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SERPINB2P05120 415 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SSBP05455 408 aaKnown RBP eCLIP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 FYNP06241 537 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 C6orf222P0C671 652 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 ALAS2P22557 587 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 MZF1P28698 734 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 NOS2P35228 1153 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 PCK1P35558 622 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SCTRP47872 440 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SARSP49591 514 aaKnown RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 PSEN2P49810 448 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 PFKPQ01813 784 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 ACY1Q03154 408 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 PUM3Q15397 648 aaKnown RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 NFIL3Q16649 462 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 GEN1Q17RS7 908 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 CNPY1Q3B7I2 92 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 SUPT20HL1Q3ZLR7 823 aa6.91□□□□□ -1.3
CLCN3-203ENST00000502998 DALRD3Q5D0E6 543 aaKnown RBP6.91□□□□□ -1.3
CLCN3-203ENST00000502998 PPP6R3Q5H9R7 873 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms