RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 NT5DC1Q5TFE4 455 aa11.79□□□□□ -0.52
SNCA-207ENST00000502987 LILRA6Q6PI73 481 aa11.79□□□□□ -0.52
SNCA-207ENST00000502987 DTHD1Q6ZMT9 781 aa11.79□□□□□ -0.52
SNCA-207ENST00000502987 GRASPQ7Z6J2 395 aaPredicted RBP11.79□□□□□ -0.52
SNCA-207ENST00000502987 SLC44A3Q8N4M1 653 aa11.79□□□□□ -0.52
SNCA-207ENST00000502987 C4orf32Q8N8J7 132 aa11.79□□□□□ -0.52
SNCA-207ENST00000502987 ST13P5Q8NFI4 369 aaPredicted RBP11.79□□□□□ -0.52
SNCA-207ENST00000502987 ZNF707Q96C28 371 aaPredicted RBP11.79□□□□□ -0.52
SNCA-207ENST00000502987 KCNK17Q96T54 332 aa11.79□□□□□ -0.52
SNCA-207ENST00000502987 CCDC94Q9BW85 323 aaPredicted RBP11.79□□□□□ -0.52
SNCA-207ENST00000502987 CCDC113Q9H0I3 377 aa11.79□□□□□ -0.52
SNCA-207ENST00000502987 CXCL16Q9H2A7 254 aa11.79□□□□□ -0.52
SNCA-207ENST00000502987 CA14Q9ULX7 337 aa11.79□□□□□ -0.52
SNCA-207ENST00000502987 KIF3AQ9Y496 699 aa11.79□□□□□ -0.52
SNCA-207ENST00000502987 PCDHB6Q9Y5E3 794 aa11.79□□□□□ -0.52
SNCA-207ENST00000502987 PP2D1A8MPX8 630 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 CCL16O15467 120 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 TRAPPC3O43617 180 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 PI15O43692 258 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 XYLBO75191 536 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 B3GAT3O94766 335 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 EDN1P05305 212 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 LAMP2P13473 410 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 OR1D2P34982 312 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 DCLRE1AQ6PJP8 1040 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 LNX1Q8TBB1 728 aaPredicted RBP11.78□□□□□ -0.52
SNCA-207ENST00000502987 PIK3R5Q8WYR1 880 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 NXPE3Q969Y0 559 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 RTP3Q9BQQ7 232 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 CLSTN3Q9BQT9 956 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 RHOBTB2Q9BYZ6 727 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 KMT5AQ9NQR1 393 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 TOPORSQ9NS56 1045 aaPredicted RBP11.78□□□□□ -0.52
SNCA-207ENST00000502987 EPS15L1Q9UBC2 864 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 DOCK8Q8NF50 2099 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 VPS13AQ96RL7 3174 aa11.78□□□□□ -0.52
SNCA-207ENST00000502987 CITO14578 2027 aa11.77□□□□□ -0.52
SNCA-207ENST00000502987 SFI1A8K8P3 1242 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 H3BQV1 296 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 LAD1O00515 517 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 HIP1RO75146 1068 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 C8AP07357 584 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 HARSP12081 509 aaKnown RBP11.77□□□□□ -0.53
SNCA-207ENST00000502987 AOC1P19801 751 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 U2AF2P26368 475 aaKnown RBP eCLIP11.77□□□□□ -0.53
SNCA-207ENST00000502987 CDC25AP30304 524 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 MATR3P43243 847 aaKnown RBP eCLIP11.77□□□□□ -0.53
SNCA-207ENST00000502987 NPTX2P47972 431 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 TOB1P50616 345 aaPredicted RBP11.77□□□□□ -0.53
SNCA-207ENST00000502987 CLCNKBP51801 687 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 NTHL1P78549 312 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 RAD51AP2Q09MP3 1159 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 DMP1Q13316 513 aaPredicted RBP11.77□□□□□ -0.53
SNCA-207ENST00000502987 ZNF568Q3ZCX4 644 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 AXDND1Q5T1B0 1012 aaPredicted RBP11.77□□□□□ -0.53
SNCA-207ENST00000502987 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.77□□□□□ -0.53
SNCA-207ENST00000502987 KCTD12Q96CX2 325 aaKnown RBP11.77□□□□□ -0.53
SNCA-207ENST00000502987 CDK5RAP3Q96JB5 506 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 DRC1Q96MC2 740 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 UROC1Q96N76 676 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 PLIN2Q99541 437 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 ACO2Q99798 780 aaKnown RBP11.77□□□□□ -0.53
SNCA-207ENST00000502987 MRPL4Q9BYD3 311 aaKnown RBP11.77□□□□□ -0.53
SNCA-207ENST00000502987 GOLGA2P5Q9HBQ8 144 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 WNT16Q9UBV4 365 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.53
SNCA-207ENST00000502987 FBXW11Q9UKB1 542 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 TNFSF13BQ9Y275 285 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 VWA8A3KMH1 1905 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 CFAP54Q96N23 3096 aa11.77□□□□□ -0.53
SNCA-207ENST00000502987 I3L4J1 428 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 ADAM12O43184 909 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 CENPBP07199 599 aaPredicted RBP11.76□□□□□ -0.53
SNCA-207ENST00000502987 HNRNPA1P09651 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNCA-207ENST00000502987 SRFP11831 508 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 NPR3P17342 541 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 ELF1P32519 619 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 ARPP19P56211 112 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 STRN3Q13033 797 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 NAB2Q15742 525 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 SPECC1Q5M775 1068 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 CWF19L1Q69YN2 538 aaKnown RBP11.76□□□□□ -0.53
SNCA-207ENST00000502987 CEP120Q8N960 986 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 IGSF22Q8N9C0 903 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 DTWD2Q8NBA8 298 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 SLC7A14Q8TBB6 771 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 GPR152Q8TDT2 470 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 ACAP3Q96P50 834 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 PPP1R10Q96QC0 940 aaKnown RBP11.76□□□□□ -0.53
SNCA-207ENST00000502987 TARS2Q9BW92 718 aaKnown RBP11.76□□□□□ -0.53
SNCA-207ENST00000502987 TMEM134Q9H6X4 195 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 SLC38A7Q9NVC3 462 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
SNCA-207ENST00000502987 CDY1Q9Y6F8 540 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 ZFP37Q9Y6Q3 630 aaPredicted RBP11.76□□□□□ -0.53
SNCA-207ENST00000502987 PHLPP2Q6ZVD8 1323 aa11.76□□□□□ -0.53
SNCA-207ENST00000502987 SMIM28A0A1B0GU29 152 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 SLC16A4O15374 487 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 FGFR3P22607 806 aa11.75□□□□□ -0.53
SNCA-207ENST00000502987 TKTP29401 623 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms