RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 TTYH3Q9C0H2 523 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 CRISPLD2Q9H0B8 497 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 RMND1Q9NWS8 449 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMEM260Q9NX78 707 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 RABL2AQ9UBK7 228 aaPredicted RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 WDR37Q9Y2I8 494 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SLC4A7Q9Y6M7 1214 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 STK36Q9NRP7 1315 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 PP2D1A8MPX8 630 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 ASAP2O43150 1006 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 USP1O94782 785 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 OXSR1O95747 527 aaPredicted RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 IL1R1P14778 569 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 DMPKQ09013 629 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 PPP2R5CQ13362 524 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 GIT2Q14161 759 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 ITIH4Q14624 930 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SEPT2Q15019 361 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 UBE2SQ16763 222 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 TKFCQ3LXA3 575 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 LIN52Q52LA3 116 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SBK1Q52WX2 424 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 IRGCQ6NXR0 463 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 LRRC8BQ6P9F7 803 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 KLHL35Q6PF15 583 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 TRIM67Q6ZTA4 783 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZNF554Q86TJ5 538 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 CHCHD4Q8N4Q1 142 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 ATP8B4Q8TF62 1192 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 SYMPKQ92797 1274 aaKnown RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 PAGE5Q96GU1 130 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 CSRNP1Q96S65 589 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 CCDC113Q9H0I3 377 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 FOXP1Q9H334 677 aaPredicted RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 ALG2Q9H553 416 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 AMACRQ9UHK6 382 aa6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 EVLQ9UI08 416 aaPredicted RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 PAIP2BQ9ULR5 123 aaKnown RBP6.16□□□□□ -1.42
SOX2-OT-218ENST00000498731 PCM1Q15154 2024 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 TRIM64CA6NLI5 447 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 SRRM3A6NNA2 597 aaPredicted RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 IPO5O00410 1097 aaKnown RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 P4HA2O15460 535 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 MAP3K7O43318 606 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 KRT38O76015 456 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 P4HBP07237 508 aaKnown RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 CALML3P27482 149 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 VPS41P49754 854 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 LACTBP83111 547 aaPredicted RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 DSG2Q14126 1118 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 RCN1Q15293 331 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 MAP7D1Q3KQU3 841 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 CRTC2Q53ET0 693 aaPredicted RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 TMC3Q7Z5M5 1100 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 DGKHQ86XP1 1220 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 MB21D1Q8N884 522 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 RBBP8NLQ8NC74 664 aaPredicted RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZNF507Q8TCN5 953 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 ACTRT1Q8TDG2 376 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 HPS3Q969F9 1004 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 DTNBP1Q96EV8 351 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 CDK5RAP3Q96JB5 506 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 PRMT6Q96LA8 375 aaPredicted RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 INPP4AQ96PE3 977 aaPredicted RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 PPP1R10Q96QC0 940 aaKnown RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 TBC1D10AQ9BXI6 508 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 LIN28AQ9H9Z2 209 aaKnown RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 HESX1Q9UBX0 185 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 LIMA1Q9UHB6 759 aaKnown RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 LUC7L2Q9Y383 392 aaKnown RBP6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 PCDHA13Q9Y5I0 950 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 NOX1Q9Y5S8 564 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 CNTNAP5Q8WYK1 1306 aa6.15□□□□□ -1.42
SOX2-OT-218ENST00000498731 ANO9A1A5B4 782 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 DDTLA6NHG4 134 aaPredicted RBP6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 A8MU76 341 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZNF862O60290 1169 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 PPP6R2O75170 966 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 MYBP10242 640 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 VAV1P15498 845 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 VCAM1P19320 739 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 CD97P48960 835 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 ADARP55265 1226 aaKnown RBP6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 POU5F1BQ06416 359 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 EHHADHQ08426 723 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 NSUN2Q08J23 767 aaKnown RBP eCLIP6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 LRP8Q14114 963 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 MAPRE1Q15691 268 aaKnown RBP6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 ACSBG2Q5FVE4 666 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 ADAT2Q7Z6V5 191 aaKnown RBP6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 PAF1Q8N7H5 531 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 MIPOL1Q8TD10 442 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 NAT14Q8WUY8 206 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCDC51Q96ER9 411 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZNF408Q9H9D4 720 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZFYVE28Q9HCC9 887 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 C6orf50Q9HD87 102 aa6.15□□□□□ -1.43
SOX2-OT-218ENST00000498731 DNAJC17Q9NVM6 304 aaKnown RBP6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms