RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 FGFR3P22607 806 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 YARSP54577 528 aaKnown RBP15.64■□□□□ 0.09
VTI1A-209ENST00000496445 NCKAP1LP55160 1127 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 ELAVL2Q12926 359 aaKnown RBP15.64■□□□□ 0.09
VTI1A-209ENST00000496445 NOLC1Q14978 699 aaKnown RBP eCLIP15.64■□□□□ 0.09
VTI1A-209ENST00000496445 SF3A1Q15459 793 aaKnown RBP15.64■□□□□ 0.09
VTI1A-209ENST00000496445 ELMSAN1Q6PJG2 1045 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 CYP26C1Q6V0L0 522 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.64■□□□□ 0.09
VTI1A-209ENST00000496445 SUGP1Q8IWZ8 645 aaKnown RBP15.64■□□□□ 0.09
VTI1A-209ENST00000496445 SMG7Q92540 1137 aaKnown RBP15.64■□□□□ 0.09
VTI1A-209ENST00000496445 ACSF2Q96CM8 615 aaPredicted RBP15.64■□□□□ 0.09
VTI1A-209ENST00000496445 UROC1Q96N76 676 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 NOTCH4Q99466 2003 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 REEP2Q9BRK0 252 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 HAPLN2Q9GZV7 340 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 TOPORSQ9NS56 1045 aaPredicted RBP15.64■□□□□ 0.09
VTI1A-209ENST00000496445 ZDHHC7Q9NXF8 308 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 CNTN3Q9P232 1028 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 ANKFY1Q9P2R3 1169 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 I3L4J1 428 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 TOM1L1O75674 476 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 B3GAT3O94766 335 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 BMP15O95972 392 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 PLCG1P19174 1290 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 TKTP29401 623 aaKnown RBP15.63■□□□□ 0.09
VTI1A-209ENST00000496445 LONP1P36776 959 aaKnown RBP15.63■□□□□ 0.09
VTI1A-209ENST00000496445 BRCC3P46736 316 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 NHLH1Q02575 133 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 KARSQ15046 597 aaKnown RBP15.63■□□□□ 0.09
VTI1A-209ENST00000496445 SEZ6Q53EL9 994 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 DCLRE1AQ6PJP8 1040 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 RSPO2Q6UXX9 243 aaPredicted RBP15.63■□□□□ 0.09
VTI1A-209ENST00000496445 GPBP1Q86WP2 473 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 KCNN1Q92952 543 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 MYADMQ96S97 322 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 BACH2Q9BYV9 841 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 PRKD2Q9BZL6 878 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 MTRRQ9UBK8 725 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 VPS13AQ96RL7 3174 aa15.63■□□□□ 0.09
VTI1A-209ENST00000496445 PODXLO00592 558 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 ZMYND10O75800 440 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 KCNE1P15382 129 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 UBA7P41226 1012 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 ZNF131P52739 623 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 SMTNP53814 917 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 MCL1Q07820 350 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 STRN3Q13033 797 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 RESTQ13127 1097 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 MCM6Q14566 821 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 PTPAQ15257 358 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 ZPBP2Q6X784 338 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 TMEM130Q8N3G9 435 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 RAD54LQ92698 747 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 C18orf25Q96B23 403 aaPredicted RBP15.62■□□□□ 0.09
VTI1A-209ENST00000496445 CALML4Q96GE6 196 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 DDX27Q96GQ7 796 aaKnown RBP15.62■□□□□ 0.09
VTI1A-209ENST00000496445 ACAP3Q96P50 834 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 TCHPQ9BT92 498 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 KCNK12Q9HB15 430 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 EPS15L1Q9UBC2 864 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 ODF2LQ9ULJ1 636 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 CLIC4Q9Y696 253 aa15.62■□□□□ 0.09
VTI1A-209ENST00000496445 TSC2P49815 1807 aa15.61■□□□□ 0.09
VTI1A-209ENST00000496445 GBP2P32456 591 aaPredicted RBP15.61■□□□□ 0.09
VTI1A-209ENST00000496445 TCF15Q12870 199 aa15.61■□□□□ 0.09
VTI1A-209ENST00000496445 DHX8Q14562 1220 aaKnown RBP15.61■□□□□ 0.09
VTI1A-209ENST00000496445 SLC10A6Q3KNW5 377 aa15.61■□□□□ 0.09
VTI1A-209ENST00000496445 FAM173BQ6P4H8 233 aa15.61■□□□□ 0.09
VTI1A-209ENST00000496445 PDXDC1Q6P996 788 aa15.61■□□□□ 0.09
VTI1A-209ENST00000496445 USP49Q70CQ1 688 aa15.61■□□□□ 0.09
VTI1A-209ENST00000496445 STAMQ92783 540 aa15.61■□□□□ 0.09
VTI1A-209ENST00000496445 SLC38A7Q9NVC3 462 aa15.61■□□□□ 0.09
VTI1A-209ENST00000496445 LARSQ9P2J5 1176 aaKnown RBP15.61■□□□□ 0.09
VTI1A-209ENST00000496445 CDY1Q9Y6F8 540 aa15.61■□□□□ 0.09
VTI1A-209ENST00000496445 K7ENM7 598 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 FAM189A1O60320 539 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 C8AP07357 584 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 CXCL8P10145 99 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 PDCP20941 246 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 SYT1P21579 422 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 OR1D2P34982 312 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 RAB33AQ14088 237 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 LIN9Q5TKA1 542 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 GET4Q7L5D6 327 aaPredicted RBP15.6■□□□□ 0.09
VTI1A-209ENST00000496445 HAUS6Q7Z4H7 955 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 RSAD2Q8WXG1 361 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 LARP4BQ92615 738 aaKnown RBP15.6■□□□□ 0.09
VTI1A-209ENST00000496445 FIZ1Q96SL8 496 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 PIDD1Q9HB75 910 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 TUBGCP4Q9UGJ1 667 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 KCNG1Q9UIX4 513 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 FBXO2Q9UK22 296 aaPredicted RBP15.6■□□□□ 0.09
VTI1A-209ENST00000496445 DUSP12Q9UNI6 340 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 CACNA1HO95180 2353 aa15.6■□□□□ 0.09
VTI1A-209ENST00000496445 H0YCG3 227 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 CLDN3O15551 220 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 NARSO43776 548 aaKnown RBP15.59■□□□□ 0.09
VTI1A-209ENST00000496445 FAM13AO94988 1023 aa15.59■□□□□ 0.09
VTI1A-209ENST00000496445 PIGRP01833 764 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms