RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 GZMAP12544 262 aa11.43□□□□□ -0.58
PRPF4B-209ENST00000494674 MATR3P43243 847 aaKnown RBP eCLIP11.43□□□□□ -0.58
PRPF4B-209ENST00000494674 IGBP1P78318 339 aa11.43□□□□□ -0.58
PRPF4B-209ENST00000494674 POU5F1BQ06416 359 aa11.43□□□□□ -0.58
PRPF4B-209ENST00000494674 ACVR2BQ13705 512 aa11.43□□□□□ -0.58
PRPF4B-209ENST00000494674 MPZL3Q6UWV2 235 aa11.43□□□□□ -0.58
PRPF4B-209ENST00000494674 METTL13Q8N6R0 699 aa11.43□□□□□ -0.58
PRPF4B-209ENST00000494674 UBR7Q8N806 425 aa11.43□□□□□ -0.58
PRPF4B-209ENST00000494674 HES6Q96HZ4 224 aa11.43□□□□□ -0.58
PRPF4B-209ENST00000494674 SEPT11Q9NVA2 429 aaKnown RBP11.43□□□□□ -0.58
PRPF4B-209ENST00000494674 RNF14Q9UBS8 474 aa11.43□□□□□ -0.58
PRPF4B-209ENST00000494674 H3BRB1 525 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 TULP1O00294 542 aaPredicted RBP11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 MEFVO15553 781 aaPredicted RBP11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 RTN2O75298 545 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 MTA2O94776 668 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 CLTAP09496 248 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 HOXC6P09630 235 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 DNA2P51530 1060 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 BIRC3Q13489 604 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 RPS6KA1Q15418 735 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 PTPROQ16827 1216 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 FAM187BQ17R55 369 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 MARCH8Q5T0T0 291 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 ATF7IP2Q5U623 682 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 WDR49Q8IV35 697 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 MSL3Q8N5Y2 521 aaKnown RBP11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 CEP120Q8N960 986 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 USP6NLQ92738 828 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 FAM81BQ96LP2 452 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 FUT8Q9BYC5 575 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 CDT1Q9H211 546 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 TUT1Q9H6E5 874 aaKnown RBP11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 ZCCHC17Q9NP64 241 aaKnown RBP11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 RBM12Q9NTZ6 932 aaKnown RBP11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 FLRT1Q9NZU1 646 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 CNTN6Q9UQ52 1028 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 TNFSF13BQ9Y275 285 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 NUB1Q9Y5A7 615 aa11.42□□□□□ -0.58
PRPF4B-209ENST00000494674 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 INO80B-WBP1J3KQ70 363 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 MAGEB2O15479 319 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 ASS1P00966 412 aaKnown RBP11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 IGHA2P01877 340 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 PDE6CP51160 858 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 NOP14P78316 857 aaKnown RBP11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 CUL2Q13617 745 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 NCOA4Q13772 614 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 LONRF2Q1L5Z9 754 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 CFAP221Q4G0U5 840 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 IQSEC1Q6DN90 963 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 MTHFD1LQ6UB35 978 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 EFCAB13Q8IY85 973 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 SYCE1Q8N0S2 351 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 TCHPQ9BT92 498 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 INO80BQ9C086 356 aaPredicted RBP11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 ARFGAP3Q9NP61 516 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 OGFRQ9NZT2 677 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 TMEM59LQ9UK28 342 aa11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 ZHX1Q9UKY1 873 aaPredicted RBP11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 PDCD11Q14690 1871 aaKnown RBP11.41□□□□□ -0.58
PRPF4B-209ENST00000494674 A0A087WZ62 844 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 KCNK3O14649 394 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 DDX3YO15523 660 aaKnown RBP11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 TUBBP07437 444 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 KRT5P13647 590 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 PHKA2P46019 1235 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 ZNF132P52740 706 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 AP3M2P53677 418 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 MAP2K5Q13163 448 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 IRF5Q13568 498 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 CLEC16AQ2KHT3 1053 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 ZNF568Q3ZCX4 644 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 WDR44Q5JSH3 913 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 CCDC181Q5TID7 509 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 PEX26Q7Z412 305 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 DAAM2Q86T65 1068 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 CDR2LQ86X02 465 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 RHOT2Q8IXI1 618 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 TMEM192Q8IY95 271 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 OR6J1Q8NGC5 347 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 HDAC7Q8WUI4 952 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 LMBR1Q8WVP7 490 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 FDXACB1Q9BRP7 624 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 LRRC1Q9BTT6 524 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 MTMR12Q9C0I1 747 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 PRMT7Q9NVM4 692 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 GNEQ9Y223 722 aaKnown RBP11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 MANSC4A6NHS7 340 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 GPR25O00155 361 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 ATMINO43313 823 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 ATP8B1O43520 1251 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 CSDE1O75534 798 aaKnown RBP11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 CST3P01034 146 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 VTNP04004 478 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 CYP1A2P05177 515 aa11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 ZNF865P0CJ78 1059 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-209ENST00000494674 UNGP13051 313 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms