RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 BBS12Q6ZW61 710 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 R3HCC1LQ7Z5L2 792 aaKnown RBP7.51□□□□□ -1.21
SNX13-210ENST00000494402 TMC3Q7Z5M5 1100 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 GATAD2AQ86YP4 633 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 ARMC8Q8IUR7 673 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 CCDC117Q8IWD4 279 aaPredicted RBP7.51□□□□□ -1.21
SNX13-210ENST00000494402 C3orf20Q8ND61 904 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 TBC1D22AQ8WUA7 517 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 FATE1Q969F0 183 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 CALML4Q96GE6 196 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 FCRL3Q96P31 734 aaPredicted RBP7.51□□□□□ -1.21
SNX13-210ENST00000494402 PDCL3Q9H2J4 239 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 CDIP1Q9H305 208 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.51□□□□□ -1.21
SNX13-210ENST00000494402 CLDND1Q9NY35 253 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 COL20A1Q9P218 1284 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 ATP6V0A2Q9Y487 856 aa7.51□□□□□ -1.21
SNX13-210ENST00000494402 ST20-MTHFSA0A0A6YYL1 179 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 NPHP3-ACAD11A0A0J9YXS1 232 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 MAN2B1O00754 1011 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 PIP5K1BO14986 540 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 CLASP2O75122 1294 aaKnown RBP7.5□□□□□ -1.21
SNX13-210ENST00000494402 PRAMEF1O95521 474 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 MLYCDO95822 493 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 CSF1P09603 554 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 CSH1P0DML2 217 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 CSH2P0DML3 217 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 HDCP19113 662 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 FGFR3P22607 806 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 SEC24CP53992 1094 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 MC1RQ01726 317 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 TFCP2Q12800 502 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 FSTL1Q12841 308 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 BFSP1Q12934 665 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 MAMLD1Q13495 774 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 PRPF4BQ13523 1007 aaKnown RBP7.5□□□□□ -1.21
SNX13-210ENST00000494402 CUL4BQ13620 913 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 SUZ12Q15022 739 aaKnown RBP7.5□□□□□ -1.21
SNX13-210ENST00000494402 TNIP1Q15025 636 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 INF2Q27J81 1249 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 ZBTB41Q5SVQ8 909 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 MCTP2Q6DN12 878 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 GALNT17Q6IS24 598 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 ALKBH5Q6P6C2 394 aaKnown RBP7.5□□□□□ -1.21
SNX13-210ENST00000494402 CRTC3Q6UUV7 619 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 GALNT7Q86SF2 657 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 CCDC170Q8IYT3 715 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.5□□□□□ -1.21
SNX13-210ENST00000494402 TAF4BQ92750 862 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 TNFRSF25Q93038 417 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 SDCCAG3Q96C92 435 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 SNX22Q96L94 193 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 CCDC43Q96MW1 224 aaKnown RBP7.5□□□□□ -1.21
SNX13-210ENST00000494402 TWNKQ96RR1 684 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 PIGSQ96S52 555 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 DDX23Q9BUQ8 820 aaKnown RBP7.5□□□□□ -1.21
SNX13-210ENST00000494402 RABEP2Q9H5N1 569 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 EPS8L2Q9H6S3 715 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 MLXIPQ9HAP2 919 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 SSU72Q9NP77 194 aaKnown RBP7.5□□□□□ -1.21
SNX13-210ENST00000494402 SACM1LQ9NTJ5 587 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 PNPOQ9NVS9 261 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 HPF1Q9NWY4 346 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 TRMT1Q9NXH9 659 aaKnown RBP7.5□□□□□ -1.21
SNX13-210ENST00000494402 STK32BQ9NY57 414 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 POGKQ9P215 609 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.5□□□□□ -1.21
SNX13-210ENST00000494402 CPA4Q9UI42 421 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 PCOLCE2Q9UKZ9 415 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 TIMM13Q9Y5L4 95 aaPredicted RBP7.5□□□□□ -1.21
SNX13-210ENST00000494402 CYP46A1Q9Y6A2 500 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 NUMBLQ9Y6R0 609 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 ABCC9O60706 1549 aa7.5□□□□□ -1.21
SNX13-210ENST00000494402 CCDC78A2IDD5 438 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 LRRC14BA6NHZ5 514 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 CCDC69A6NI79 296 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 ERAL1O75616 437 aaKnown RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 TK1P04183 234 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 CHGBP05060 677 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 QDPRP09417 244 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 HSPA1AP0DMV8 641 aaKnown RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 HSPA1BP0DMV9 641 aaKnown RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 TNNT2P45379 298 aaPredicted RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 ALDH3A2P51648 485 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 NLRP12P59046 1061 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 RBP5P82980 135 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 TUSC3Q13454 348 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 TAF7Q15545 349 aaPredicted RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 ADRM1Q16186 407 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 MUM1L1Q5H9M0 696 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 C3orf38Q5JPI3 329 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 ZNF468Q5VIY5 522 aaPredicted RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 LETMD1Q6P1Q0 360 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 C11orf88Q6PI97 169 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 HEATR3Q7Z4Q2 680 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 CDH24Q86UP0 819 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 CEP97Q8IW35 865 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 PLD6Q8N2A8 252 aaKnown RBP7.49□□□□□ -1.21
SNX13-210ENST00000494402 ZNF619Q8N2I2 560 aa7.49□□□□□ -1.21
SNX13-210ENST00000494402 GOLGA6L1Q8N7Z2 621 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms