RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ACOT2P49753 483 aa14.77□□□□□ -0.04
VCP-207ENST00000493886 HADHBP55084 474 aaKnown RBP14.77□□□□□ -0.04
VCP-207ENST00000493886 GPC5P78333 572 aa14.77□□□□□ -0.04
VCP-207ENST00000493886 CLDN10P78369 228 aa14.77□□□□□ -0.04
VCP-207ENST00000493886 FMO1Q01740 532 aa14.77□□□□□ -0.04
VCP-207ENST00000493886 TTC31Q49AM3 519 aaPredicted RBP14.77□□□□□ -0.04
VCP-207ENST00000493886 LMBRD2Q68DH5 695 aaPredicted RBP14.77□□□□□ -0.04
VCP-207ENST00000493886 SLFN12LQ6IEE8 588 aa14.77□□□□□ -0.04
VCP-207ENST00000493886 DHX38Q92620 1227 aaKnown RBP14.77□□□□□ -0.04
VCP-207ENST00000493886 RNPC3Q96LT9 517 aaKnown RBP14.77□□□□□ -0.04
VCP-207ENST00000493886 TARS2Q9BW92 718 aaKnown RBP14.77□□□□□ -0.04
VCP-207ENST00000493886 CTTNBP2NLQ9P2B4 639 aa14.77□□□□□ -0.04
VCP-207ENST00000493886 SIP14410 1827 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 KLHL33A6NCF5 533 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 NDUFAB1O14561 156 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 ZC3H11AO75152 810 aaKnown RBP eCLIP14.77□□□□□ -0.05
VCP-207ENST00000493886 TNNI1P19237 187 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 PDE6CP51160 858 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 WNT7BP56706 349 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 ERVK-9P63128 1117 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 NAA35Q5VZE5 725 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 DPY19L2Q6NUT2 758 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 ZC3H15Q8WU90 426 aaKnown RBP14.77□□□□□ -0.05
VCP-207ENST00000493886 SYT17Q9BSW7 474 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 AZI2Q9H6S1 392 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 TMEM134Q9H6X4 195 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 FAM169AQ9Y6X4 670 aa14.77□□□□□ -0.05
VCP-207ENST00000493886 DDX3YO15523 660 aaKnown RBP14.76□□□□□ -0.05
VCP-207ENST00000493886 MAFO75444 373 aaPredicted RBP14.76□□□□□ -0.05
VCP-207ENST00000493886 OSBPP22059 807 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 EPHX2P34913 555 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 GCNT1Q02742 428 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 CAPSQ13938 189 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 TCEAL1Q15170 157 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 CEP85LQ5SZL2 805 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 ALS2CLQ60I27 953 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 CRELD2Q6UXH1 353 aaPredicted RBP14.76□□□□□ -0.05
VCP-207ENST00000493886 ENOSF1Q7L5Y1 443 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 FASTKD5Q7L8L6 764 aaKnown RBP14.76□□□□□ -0.05
VCP-207ENST00000493886 ADAT2Q7Z6V5 191 aaKnown RBP14.76□□□□□ -0.05
VCP-207ENST00000493886 MMP19Q99542 508 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 IRAK4Q9NWZ3 460 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 EDN1P05305 212 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 CDR2Q01850 454 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 DRP2Q13474 957 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 KCTD2Q14681 263 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 ZACNQ401N2 412 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 L3MBTL3Q96JM7 780 aaPredicted RBP14.76□□□□□ -0.05
VCP-207ENST00000493886 FAM167AQ96KS9 214 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 MSTO1Q9BUK6 570 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 C1orf112Q9NSG2 853 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 ANKFY1Q9P2R3 1169 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 PLAAQ9Y263 795 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 DNAJC25-GNG10A0A024R161 153 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 ADCY3O60266 1144 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 LDHAP00338 332 aaKnown RBP14.76□□□□□ -0.05
VCP-207ENST00000493886 ITGA4P13612 1032 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 KCNV1Q6PIU1 500 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 GLG1Q92896 1179 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 GPR20Q99678 358 aa14.76□□□□□ -0.05
VCP-207ENST00000493886 A0A0B4J269 797 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 KRIT1O00522 736 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 C4BPAP04003 597 aaKnown RBP14.75□□□□□ -0.05
VCP-207ENST00000493886 KRT5P13647 590 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 MARK3P27448 753 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 MTA1Q13330 715 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 HSDL1Q3SXM5 330 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 ZBTB41Q5SVQ8 909 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 CELF3Q5SZQ8 465 aaKnown RBP14.75□□□□□ -0.05
VCP-207ENST00000493886 C1QTNF12Q5T7M4 302 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 WDR78Q5VTH9 848 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 TDRD10Q5VZ19 366 aaKnown RBP14.75□□□□□ -0.05
VCP-207ENST00000493886 GPAT2Q6NUI2 795 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 IQCKQ8N0W5 287 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 DDX1Q92499 740 aaKnown RBP14.75□□□□□ -0.05
VCP-207ENST00000493886 FAM81BQ96LP2 452 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 TRIM31Q9BZY9 425 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 RBAKQ9NYW8 714 aaPredicted RBP14.75□□□□□ -0.05
VCP-207ENST00000493886 DIS3Q9Y2L1 958 aaKnown RBP14.75□□□□□ -0.05
VCP-207ENST00000493886 ALG6Q9Y672 507 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 CCDC188H7C350 402 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 NOP56O00567 594 aaKnown RBP14.75□□□□□ -0.05
VCP-207ENST00000493886 HLA-DRAP01903 254 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 MAP2K2P36507 400 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 SEC24CP53992 1094 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 INHBEP58166 350 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 WDR44Q5JSH3 913 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 DCAF12L1Q5VU92 463 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 C11orf63Q6NUN7 778 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 ARMC9Q7Z3E5 817 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 TRIM50Q86XT4 487 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 PRPF31Q8WWY3 499 aaKnown RBP14.75□□□□□ -0.05
VCP-207ENST00000493886 NEUROG2Q9H2A3 272 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 TTC7AQ9ULT0 858 aaPredicted RBP14.75□□□□□ -0.05
VCP-207ENST00000493886 PPME1Q9Y570 386 aa14.75□□□□□ -0.05
VCP-207ENST00000493886 PTPRJQ12913 1337 aa14.74□□□□□ -0.05
VCP-207ENST00000493886 NR1D1P20393 614 aa14.74□□□□□ -0.05
VCP-207ENST00000493886 PIK3CAP42336 1068 aa14.74□□□□□ -0.05
VCP-207ENST00000493886 BIRC3Q13489 604 aa14.74□□□□□ -0.05
VCP-207ENST00000493886 TADA2BQ86TJ2 420 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms