RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 FAM105AQ9NUU6 356 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 RNF19AQ9NV58 838 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 RGL1Q9NZL6 768 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 KANSL3Q9P2N6 904 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 MUTYHQ9UIF7 546 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 MKL2Q9ULH7 1088 aa8.4□□□□□ -1.06
RBM39-238ENST00000493853 TTC3P53804 2025 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 MUC3AQ02505 3323 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.39□□□□□ -1.07
RBM39-238ENST00000493853 HIDE1A8MVS5 230 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 FSCN2O14926 492 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 ZNF623O75123 536 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 CTDNEP1O95476 244 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 GLP2RO95838 553 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 ALDH2P05091 517 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 ATF7P17544 494 aaPredicted RBP8.39□□□□□ -1.07
RBM39-238ENST00000493853 TXKP42681 527 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 PCBP4P57723 403 aaKnown RBP8.39□□□□□ -1.07
RBM39-238ENST00000493853 RBM10P98175 930 aaKnown RBP8.39□□□□□ -1.07
RBM39-238ENST00000493853 LAMTOR4Q0VGL1 99 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 GNL2Q13823 731 aaKnown RBP8.39□□□□□ -1.07
RBM39-238ENST00000493853 GIT2Q14161 759 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 TFDP1Q14186 410 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 CTTNQ14247 550 aaKnown RBP8.39□□□□□ -1.07
RBM39-238ENST00000493853 MXD4Q14582 209 aaPredicted RBP8.39□□□□□ -1.07
RBM39-238ENST00000493853 ME3Q16798 604 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 HERC4Q5GLZ8 1057 aaPredicted RBP8.39□□□□□ -1.07
RBM39-238ENST00000493853 ANKRD54Q6NXT1 300 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 TMEM184AQ6ZMB5 413 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 SLC39A11Q8N1S5 342 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 RNF149Q8NC42 400 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 HAS1Q92839 578 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 BTBD6Q96KE9 485 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 CEP63Q96MT8 703 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 CEP89Q96ST8 783 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 EIF2AK1Q9BQI3 630 aaKnown RBP8.39□□□□□ -1.07
RBM39-238ENST00000493853 DHX33Q9H6R0 707 aaKnown RBP8.39□□□□□ -1.07
RBM39-238ENST00000493853 IFT122Q9HBG6 1241 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 AVENQ9NQS1 362 aaPredicted RBP8.39□□□□□ -1.07
RBM39-238ENST00000493853 VAV3Q9UKW4 847 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 PCDHB2Q9Y5E7 798 aa8.39□□□□□ -1.07
RBM39-238ENST00000493853 C2orf71A6NGG8 1288 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 BTBD18B2RXH4 712 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 INO80B-WBP1J3KQ70 363 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 ZBTB39O15060 712 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 NEMFO60524 1076 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 SLITRK3O94933 977 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 FDPSP14324 419 aaKnown RBP8.38□□□□□ -1.07
RBM39-238ENST00000493853 ATP2B1P20020 1258 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 ITIH3Q06033 890 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 SFSWAPQ12872 951 aaKnown RBP8.38□□□□□ -1.07
RBM39-238ENST00000493853 CBX2Q14781 532 aaPredicted RBP8.38□□□□□ -1.07
RBM39-238ENST00000493853 EMC2Q15006 297 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 PCBP1Q15365 356 aaKnown RBP eCLIP8.38□□□□□ -1.07
RBM39-238ENST00000493853 ZNF468Q5VIY5 522 aaPredicted RBP8.38□□□□□ -1.07
RBM39-238ENST00000493853 DDX53Q86TM3 631 aaKnown RBP8.38□□□□□ -1.07
RBM39-238ENST00000493853 FERMT3Q86UX7 667 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 DIS3L2Q8IYB7 885 aaKnown RBP8.38□□□□□ -1.07
RBM39-238ENST00000493853 HACE1Q8IYU2 909 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 CNNM3Q8NE01 707 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 EDAQ92838 391 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 GTF3C6Q969F1 213 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 PBXIP1Q96AQ6 731 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 IGSF21Q96ID5 467 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 SUSD3Q96L08 255 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 TRIM6Q9C030 488 aaPredicted RBP8.38□□□□□ -1.07
RBM39-238ENST00000493853 TTC12Q9H892 705 aaPredicted RBP8.38□□□□□ -1.07
RBM39-238ENST00000493853 RSAD1Q9HA92 442 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 UBN1Q9NPG3 1134 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 AGPAT5Q9NUQ2 364 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 TBC1D13Q9NVG8 400 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 STK39Q9UEW8 545 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 KLF15Q9UIH9 416 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 FAN1Q9Y2M0 1017 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 NR2E1Q9Y466 385 aa8.38□□□□□ -1.07
RBM39-238ENST00000493853 BDP1A6H8Y1 2624 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 CNTNAP2Q9UHC6 1331 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 LOC730098B7Z3J9 87 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 OFD1O75665 1012 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 GALTP07902 379 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 ITGA4P13612 1032 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 SP100P23497 879 aaPredicted RBP8.37□□□□□ -1.07
RBM39-238ENST00000493853 AXLP30530 894 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 MCM7P33993 719 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 EARS2Q5JPH6 523 aaKnown RBP8.37□□□□□ -1.07
RBM39-238ENST00000493853 ATAT1Q5SQI0 421 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 NOTUMQ6P988 496 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 HFE2Q6ZVN8 426 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 PPFIBP1Q86W92 1011 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 SUGP1Q8IWZ8 645 aaKnown RBP8.37□□□□□ -1.07
RBM39-238ENST00000493853 NSUN7Q8NE18 718 aaKnown RBP8.37□□□□□ -1.07
RBM39-238ENST00000493853 VN1R2Q8NFZ6 395 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 FAM200AQ8TCP9 573 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 PIGOQ8TEQ8 1089 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 AUTS2Q8WXX7 1259 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 SUSD6Q92537 303 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 RIPOR3Q96MK2 946 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 NECTIN4Q96NY8 510 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 EMILIN2Q9BXX0 1053 aa8.37□□□□□ -1.07
RBM39-238ENST00000493853 S1PR5Q9H228 398 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms