RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 NCAPG2Q86XI2 1143 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 MAP4K3Q8IVH8 894 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 FAM133AQ8N9E0 248 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 LMBR1Q8WVP7 490 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 SLC7A3Q8WY07 619 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 IFT43Q96FT9 208 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 NOX5Q96PH1 765 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 STK33Q9BYT3 514 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 AZI2Q9H6S1 392 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 ELP3Q9H9T3 547 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 KMT5AQ9NQR1 393 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 ZNF302Q9NR11 478 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 CYP26B1Q9NR63 512 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 GCNT4Q9P109 453 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 ARHGAP20Q9P2F6 1191 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 RNF14Q9UBS8 474 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 USP20Q9Y2K6 914 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 PCDHA13Q9Y5I0 950 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 ZMYM2Q9UBW7 1377 aa10.88□□□□□ -0.67
PRPF3-206ENST00000493553 SMCHD1A6NHR9 2005 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 CTAGE15A4D2H0 777 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 CCDC169A6NNP5 214 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 CLIC2O15247 247 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 TADA3O75528 432 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 NOL4O94818 638 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 CTAGE8P0CG41 777 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 GCLCP48506 637 aaPredicted RBP10.87□□□□□ -0.67
PRPF3-206ENST00000493553 KLK7P49862 253 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 CYP2J2P51589 502 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 EFNA5P52803 228 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 MYL7Q01449 175 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 PRKCEQ02156 737 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 BMS1Q14692 1282 aaKnown RBP10.87□□□□□ -0.67
PRPF3-206ENST00000493553 ZC2HC1CQ53FD0 456 aaPredicted RBP10.87□□□□□ -0.67
PRPF3-206ENST00000493553 PAPD7Q5XG87 772 aaKnown RBP10.87□□□□□ -0.67
PRPF3-206ENST00000493553 METTL7BQ6UX53 244 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 CTAGE6Q86UF2 777 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 CTAGE4Q8IX94 777 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 ABRAQ8N0Z2 381 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 SLC35F6Q8N357 371 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 AFAP1L1Q8TED9 768 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 SEPT1Q8WYJ6 367 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 WNK4Q96J92 1243 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 TAF1DQ9H5J8 278 aaPredicted RBP10.87□□□□□ -0.67
PRPF3-206ENST00000493553 PRDM6Q9NQX0 595 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 TBX20Q9UMR3 447 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 STARD13Q9Y3M8 1113 aa10.87□□□□□ -0.67
PRPF3-206ENST00000493553 IGKV6D-21A0A0A0MT36 114 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 ZBTB39O15060 712 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 ATP8B1O43520 1251 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 STRNO43815 780 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 LDHAP00338 332 aaKnown RBP10.86□□□□□ -0.67
PRPF3-206ENST00000493553 TCP1P17987 556 aaKnown RBP10.86□□□□□ -0.67
PRPF3-206ENST00000493553 NAMPTP43490 491 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 NPTX2P47972 431 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 VAMP7P51809 220 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 GTF2A2P52657 109 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 POLGP54098 1239 aaPredicted RBP10.86□□□□□ -0.67
PRPF3-206ENST00000493553 PEX3P56589 373 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 CHMP4BP1P59074 171 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 STRN3Q13033 797 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 ASTE1Q2TB18 679 aaPredicted RBP10.86□□□□□ -0.67
PRPF3-206ENST00000493553 TREML2Q5T2D2 321 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 HGSNATQ68CP4 663 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 ANO5Q75V66 913 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 ENOSF1Q7L5Y1 443 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 TMEM161BQ8NDZ6 487 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 MORC4Q8TE76 937 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 TCP11Q8WWU5 503 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 RUBCNQ92622 972 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 CRACR2AQ9BSW2 395 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 CARD6Q9BX69 1037 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 NLRC4Q9NPP4 1024 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 PDLIM7Q9NR12 457 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 HSPBP1Q9NZL4 362 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 REXO2Q9Y3B8 237 aaKnown RBP10.86□□□□□ -0.67
PRPF3-206ENST00000493553 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.86□□□□□ -0.67
PRPF3-206ENST00000493553 SAR1BQ9Y6B6 198 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 SBF1O95248 1867 aa10.86□□□□□ -0.67
PRPF3-206ENST00000493553 KRBA1A5PL33 1030 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 ZC3H11AO75152 810 aaKnown RBP eCLIP10.85□□□□□ -0.67
PRPF3-206ENST00000493553 ERLIN1O75477 346 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 ITGB2P05107 769 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 YBX3P16989 372 aaKnown RBP eCLIP10.85□□□□□ -0.67
PRPF3-206ENST00000493553 ERCC3P19447 782 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 CASP4P49662 377 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 ITIH3Q06033 890 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 NAB2Q15742 525 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 CLUL1Q15846 466 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 GPR162Q16538 588 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 UGCGQ16739 394 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 UTP14CQ5TAP6 766 aaKnown RBP10.85□□□□□ -0.67
PRPF3-206ENST00000493553 PLPPR4Q7Z2D5 763 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 OPTNQ96CV9 577 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 TRIM11Q96F44 468 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 MMP19Q99542 508 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 INTS2Q9H0H0 1204 aaKnown RBP10.85□□□□□ -0.67
PRPF3-206ENST00000493553 PORCNQ9H237 461 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 MLXIPQ9HAP2 919 aa10.85□□□□□ -0.67
PRPF3-206ENST00000493553 BTBD7Q9P203 1132 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms