RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 ARL6IP4Q66PJ3 421 aaKnown RBP20.23■□□□□ 0.83
CHD1L-209ENST00000492728 MPZL3Q6UWV2 235 aa20.23■□□□□ 0.83
CHD1L-209ENST00000492728 GET4Q7L5D6 327 aaPredicted RBP20.23■□□□□ 0.83
CHD1L-209ENST00000492728 SPIRE2Q8WWL2 714 aa20.23■□□□□ 0.83
CHD1L-209ENST00000492728 DDX27Q96GQ7 796 aaKnown RBP20.23■□□□□ 0.83
CHD1L-209ENST00000492728 DOCK6Q96HP0 2047 aa20.23■□□□□ 0.83
CHD1L-209ENST00000492728 NTPCRQ9BSD7 190 aaKnown RBP20.23■□□□□ 0.83
CHD1L-209ENST00000492728 CCDC94Q9BW85 323 aaPredicted RBP20.23■□□□□ 0.83
CHD1L-209ENST00000492728 HAPLN2Q9GZV7 340 aa20.23■□□□□ 0.83
CHD1L-209ENST00000492728 FAM86C1Q9NVL1 165 aa20.23■□□□□ 0.83
CHD1L-209ENST00000492728 EPS15L1Q9UBC2 864 aa20.23■□□□□ 0.83
CHD1L-209ENST00000492728 MTRRQ9UBK8 725 aa20.23■□□□□ 0.83
CHD1L-209ENST00000492728 MCF2P10911 925 aa20.22■□□□□ 0.83
CHD1L-209ENST00000492728 MCM2P49736 904 aa20.22■□□□□ 0.83
CHD1L-209ENST00000492728 ELAVL2Q12926 359 aaKnown RBP20.22■□□□□ 0.83
CHD1L-209ENST00000492728 LARP1BQ659C4 914 aaKnown RBP20.22■□□□□ 0.83
CHD1L-209ENST00000492728 ELMSAN1Q6PJG2 1045 aa20.22■□□□□ 0.83
CHD1L-209ENST00000492728 C18orf25Q96B23 403 aaPredicted RBP20.22■□□□□ 0.83
CHD1L-209ENST00000492728 TIPINQ9BVW5 301 aa20.22■□□□□ 0.83
CHD1L-209ENST00000492728 C17orf75Q9HAS0 396 aa20.22■□□□□ 0.83
CHD1L-209ENST00000492728 UPF2Q9HAU5 1272 aaKnown RBP20.22■□□□□ 0.83
CHD1L-209ENST00000492728 PIDD1Q9HB75 910 aa20.22■□□□□ 0.83
CHD1L-209ENST00000492728 BLOC1S4Q9NUP1 217 aa20.22■□□□□ 0.83
CHD1L-209ENST00000492728 CNTN3Q9P232 1028 aa20.22■□□□□ 0.83
CHD1L-209ENST00000492728 RBM19Q9Y4C8 960 aaKnown RBP20.22■□□□□ 0.83
CHD1L-209ENST00000492728 C8AP07357 584 aa20.21■□□□□ 0.83
CHD1L-209ENST00000492728 KCNE1P15382 129 aa20.21■□□□□ 0.83
CHD1L-209ENST00000492728 NPR3P17342 541 aa20.21■□□□□ 0.83
CHD1L-209ENST00000492728 DCLRE1AQ6PJP8 1040 aa20.21■□□□□ 0.83
CHD1L-209ENST00000492728 STAMQ92783 540 aa20.21■□□□□ 0.83
CHD1L-209ENST00000492728 UROC1Q96N76 676 aa20.21■□□□□ 0.83
CHD1L-209ENST00000492728 ANKFY1Q9P2R3 1169 aa20.21■□□□□ 0.83
CHD1L-209ENST00000492728 PODXLO00592 558 aa20.2■□□□□ 0.82
CHD1L-209ENST00000492728 CCL16O15467 120 aa20.2■□□□□ 0.82
CHD1L-209ENST00000492728 OR1D2P34982 312 aa20.2■□□□□ 0.82
CHD1L-209ENST00000492728 YARSP54577 528 aaKnown RBP20.2■□□□□ 0.82
CHD1L-209ENST00000492728 CUL4AQ13619 759 aa20.2■□□□□ 0.82
CHD1L-209ENST00000492728 RAB33AQ14088 237 aa20.2■□□□□ 0.82
CHD1L-209ENST00000492728 NOLC1Q14978 699 aaKnown RBP eCLIP20.2■□□□□ 0.82
CHD1L-209ENST00000492728 APBB1IPQ7Z5R6 666 aaPredicted RBP20.2■□□□□ 0.82
CHD1L-209ENST00000492728 GRASPQ7Z6J2 395 aaPredicted RBP20.2■□□□□ 0.82
CHD1L-209ENST00000492728 SLC7A14Q8TBB6 771 aa20.2■□□□□ 0.82
CHD1L-209ENST00000492728 ACAP3Q96P50 834 aa20.2■□□□□ 0.82
CHD1L-209ENST00000492728 REEP2Q9BRK0 252 aa20.2■□□□□ 0.82
CHD1L-209ENST00000492728 TOPORSQ9NS56 1045 aaPredicted RBP20.2■□□□□ 0.82
CHD1L-209ENST00000492728 IGSF9Q9P2J2 1179 aa20.2■□□□□ 0.82
CHD1L-209ENST00000492728 CDY1Q9Y6F8 540 aa20.2■□□□□ 0.82
CHD1L-209ENST00000492728 TOM1L1O75674 476 aa20.19■□□□□ 0.82
CHD1L-209ENST00000492728 LAMP2P13473 410 aa20.19■□□□□ 0.82
CHD1L-209ENST00000492728 NCKAP1LP55160 1127 aa20.19■□□□□ 0.82
CHD1L-209ENST00000492728 KARSQ15046 597 aaKnown RBP20.19■□□□□ 0.82
CHD1L-209ENST00000492728 SLC10A6Q3KNW5 377 aa20.19■□□□□ 0.82
CHD1L-209ENST00000492728 LIN9Q5TKA1 542 aa20.19■□□□□ 0.82
CHD1L-209ENST00000492728 ASTLQ6HA08 431 aaPredicted RBP20.19■□□□□ 0.82
CHD1L-209ENST00000492728 CDK5RAP3Q96JB5 506 aa20.19■□□□□ 0.82
CHD1L-209ENST00000492728 PRRX2Q99811 253 aa20.19■□□□□ 0.82
CHD1L-209ENST00000492728 TCHPQ9BT92 498 aa20.19■□□□□ 0.82
CHD1L-209ENST00000492728 HCFC1R1Q9NWW0 138 aa20.19■□□□□ 0.82
CHD1L-209ENST00000492728 TUBGCP4Q9UGJ1 667 aa20.19■□□□□ 0.82
CHD1L-209ENST00000492728 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.19■□□□□ 0.82
CHD1L-209ENST00000492728 PDCD11Q14690 1871 aaKnown RBP20.19■□□□□ 0.82
CHD1L-209ENST00000492728 MYH11P35749 1972 aa20.19■□□□□ 0.82
CHD1L-209ENST00000492728 GALR2O43603 387 aaPredicted RBP20.18■□□□□ 0.82
CHD1L-209ENST00000492728 PI15O43692 258 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 HNRNPA1P09651 372 aaKnown RBP eCLIP20.18■□□□□ 0.82
CHD1L-209ENST00000492728 CXCL8P10145 99 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 PLCG1P19174 1290 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 MCL1Q07820 350 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 HTR4Q13639 388 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 SF3A1Q15459 793 aaKnown RBP20.18■□□□□ 0.82
CHD1L-209ENST00000492728 PPM1LQ5SGD2 360 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 ZBTB41Q5SVQ8 909 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 AXDND1Q5T1B0 1012 aaPredicted RBP20.18■□□□□ 0.82
CHD1L-209ENST00000492728 PDXDC1Q6P996 788 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 ZPBP2Q6X784 338 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 GPBP1Q86WP2 473 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 SLC44A3Q8N4M1 653 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 KCTD17Q8N5Z5 321 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 FLCNQ8NFG4 579 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 ITFG1Q8TB96 612 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 AK8Q96MA6 479 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 KCND2Q9NZV8 630 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 BACE2Q9Y5Z0 518 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 CITO14578 2027 aa20.18■□□□□ 0.82
CHD1L-209ENST00000492728 NOTCH4Q99466 2003 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 KRBA1A5PL33 1030 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 ANHXE9PGG2 379 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 H0Y858 1186 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 CFHP08603 1231 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 FSHRP23945 695 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 HOXA9P31269 272 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 TNFSF9P41273 254 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 SPAG1Q07617 926 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 STRN3Q13033 797 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 DHX8Q14562 1220 aaKnown RBP20.17■□□□□ 0.82
CHD1L-209ENST00000492728 MCM6Q14566 821 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 VARS2Q5ST30 1063 aaKnown RBP20.17■□□□□ 0.82
CHD1L-209ENST00000492728 USP49Q70CQ1 688 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 BRAPQ7Z569 592 aa20.17■□□□□ 0.82
CHD1L-209ENST00000492728 SIX5Q8N196 739 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms