RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 PHOX2BQ99453 314 aa18.91■□□□□ 0.62
SGMS1-204ENST00000492601 PRRX2Q99811 253 aa18.91■□□□□ 0.62
SGMS1-204ENST00000492601 MFSD1Q9H3U5 465 aa18.91■□□□□ 0.62
SGMS1-204ENST00000492601 ANKFY1Q9P2R3 1169 aa18.91■□□□□ 0.62
SGMS1-204ENST00000492601 DAXXQ9UER7 740 aaPredicted RBP18.91■□□□□ 0.62
SGMS1-204ENST00000492601 TMEM189-UBE2V1I3L0A0 370 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 PAPLNO95428 1278 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 MCF2P10911 925 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 FGFR3P22607 806 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 PROZP22891 400 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 TKTP29401 623 aaKnown RBP18.9■□□□□ 0.62
SGMS1-204ENST00000492601 OR1D2P34982 312 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 BRCC3P46736 316 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 SMTNP53814 917 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 LIN9Q5TKA1 542 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 PDXDC1Q6P996 788 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 TMEM161BQ8NDZ6 487 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 SPIRE2Q8WWL2 714 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 SNX27Q96L92 541 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 ZMAT2Q96NC0 199 aaKnown RBP18.9■□□□□ 0.62
SGMS1-204ENST00000492601 ACAP3Q96P50 834 aa18.9■□□□□ 0.62
SGMS1-204ENST00000492601 NTPCRQ9BSD7 190 aaKnown RBP18.9■□□□□ 0.62
SGMS1-204ENST00000492601 USP34Q70CQ2 3546 aa18.89■□□□□ 0.61
SGMS1-204ENST00000492601 CCL16O15467 120 aa18.89■□□□□ 0.61
SGMS1-204ENST00000492601 NARSO43776 548 aaKnown RBP18.89■□□□□ 0.61
SGMS1-204ENST00000492601 MAPTP10636 758 aaKnown RBP18.89■□□□□ 0.61
SGMS1-204ENST00000492601 DHX8Q14562 1220 aaKnown RBP18.89■□□□□ 0.61
SGMS1-204ENST00000492601 SEZ6Q53EL9 994 aa18.89■□□□□ 0.61
SGMS1-204ENST00000492601 XKR4Q5GH76 650 aa18.89■□□□□ 0.61
SGMS1-204ENST00000492601 PPM1LQ5SGD2 360 aa18.89■□□□□ 0.61
SGMS1-204ENST00000492601 TMEM105Q8N8V8 129 aa18.89■□□□□ 0.61
SGMS1-204ENST00000492601 ST13P5Q8NFI4 369 aaPredicted RBP18.89■□□□□ 0.61
SGMS1-204ENST00000492601 IGSF9Q9P2J2 1179 aa18.89■□□□□ 0.61
SGMS1-204ENST00000492601 EPS15L1Q9UBC2 864 aa18.89■□□□□ 0.61
SGMS1-204ENST00000492601 FBXL21Q9UKT6 434 aa18.89■□□□□ 0.61
SGMS1-204ENST00000492601 DUSP12Q9UNI6 340 aa18.89■□□□□ 0.61
SGMS1-204ENST00000492601 CDY1Q9Y6F8 540 aa18.89■□□□□ 0.61
SGMS1-204ENST00000492601 MEFVO15553 781 aaPredicted RBP18.88■□□□□ 0.61
SGMS1-204ENST00000492601 C8AP07357 584 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 UBA7P41226 1012 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 NTHL1P78549 312 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 GRIN1Q05586 938 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 NOLC1Q14978 699 aaKnown RBP eCLIP18.88■□□□□ 0.61
SGMS1-204ENST00000492601 ARSHQ5FYA8 562 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 RSPO2Q6UXX9 243 aaPredicted RBP18.88■□□□□ 0.61
SGMS1-204ENST00000492601 GRASPQ7Z6J2 395 aaPredicted RBP18.88■□□□□ 0.61
SGMS1-204ENST00000492601 KCTD17Q8N5Z5 321 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 FLCNQ8NFG4 579 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 LRRC15Q8TF66 581 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 C18orf25Q96B23 403 aaPredicted RBP18.88■□□□□ 0.61
SGMS1-204ENST00000492601 CALML4Q96GE6 196 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 DDX27Q96GQ7 796 aaKnown RBP18.88■□□□□ 0.61
SGMS1-204ENST00000492601 AK8Q96MA6 479 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 SLC38A7Q9NVC3 462 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 FAM86C1Q9NVL1 165 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 KCND2Q9NZV8 630 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 MTRRQ9UBK8 725 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 KCNG1Q9UIX4 513 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 POLIQ9UNA4 740 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 ZFHX2Q9C0A1 2572 aaPredicted RBP18.88■□□□□ 0.61
SGMS1-204ENST00000492601 MYO15AQ9UKN7 3530 aa18.88■□□□□ 0.61
SGMS1-204ENST00000492601 VPS37CA5D8V6 355 aaPredicted RBP18.87■□□□□ 0.61
SGMS1-204ENST00000492601 PODXLO00592 558 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 TRAPPC3O43617 180 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 TOM1L1O75674 476 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 KCNE1P15382 129 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 FSHRP23945 695 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 MATR3P43243 847 aaKnown RBP eCLIP18.87■□□□□ 0.613e-6■□□□□ 9.9
SGMS1-204ENST00000492601 RAB33AQ14088 237 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 AXDND1Q5T1B0 1012 aaPredicted RBP18.87■□□□□ 0.61
SGMS1-204ENST00000492601 ASTLQ6HA08 431 aaPredicted RBP18.87■□□□□ 0.61
SGMS1-204ENST00000492601 BRAPQ7Z569 592 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 GPBP1Q86WP2 473 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 RASSF8Q8NHQ8 419 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 SLC7A14Q8TBB6 771 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 BICD1Q96G01 975 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 REEP2Q9BRK0 252 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.87■□□□□ 0.61
SGMS1-204ENST00000492601 CNTN3Q9P232 1028 aa18.87■□□□□ 0.61
SGMS1-204ENST00000492601 CLDN3O15551 220 aa18.86■□□□□ 0.61
SGMS1-204ENST00000492601 CFHP08603 1231 aa18.86■□□□□ 0.61
SGMS1-204ENST00000492601 HNRNPA1P09651 372 aaKnown RBP eCLIP18.86■□□□□ 0.61
SGMS1-204ENST00000492601 LAMP2P13473 410 aa18.86■□□□□ 0.61
SGMS1-204ENST00000492601 KARSQ15046 597 aaKnown RBP18.86■□□□□ 0.61
SGMS1-204ENST00000492601 SF3A1Q15459 793 aaKnown RBP18.86■□□□□ 0.61
SGMS1-204ENST00000492601 SLC10A6Q3KNW5 377 aa18.86■□□□□ 0.61
SGMS1-204ENST00000492601 SIX5Q8N196 739 aa18.86■□□□□ 0.61
SGMS1-204ENST00000492601 SLC44A3Q8N4M1 653 aa18.86■□□□□ 0.61
SGMS1-204ENST00000492601 LARSQ9P2J5 1176 aaKnown RBP18.86■□□□□ 0.61
SGMS1-204ENST00000492601 TCHHQ07283 1943 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 H0Y858 1186 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 GALR2O43603 387 aaPredicted RBP18.85■□□□□ 0.61
SGMS1-204ENST00000492601 BMP15O95972 392 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 CXCL8P10145 99 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 PLCG1P19174 1290 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 NCKAP1LP55160 1127 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 MCM6Q14566 821 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 CWF19L1Q69YN2 538 aaKnown RBP18.85■□□□□ 0.61
SGMS1-204ENST00000492601 ZPBP2Q6X784 338 aa18.85■□□□□ 0.61
SGMS1-204ENST00000492601 ANKS3Q6ZW76 656 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms