RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 MT-CO1P00395 513 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 CELA3BP08861 270 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 KCNA2P16389 499 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 STAT5BP51692 787 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 GJA9P57773 515 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 DGKDQ16760 1214 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.43□□□□□ -1.54
RTN4-215ENST00000491592 CT83Q5H943 113 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 PITRM1Q5JRX3 1037 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 C16orf54Q6UWD8 224 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 GPR155Q7Z3F1 870 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 SP8Q8IXZ3 490 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 TRMT2AQ8IZ69 625 aaKnown RBP5.43□□□□□ -1.54
RTN4-215ENST00000491592 CDYL2Q8N8U2 506 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 TGFBRAP1Q8WUH2 860 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 NUP133Q8WUM0 1156 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 ORAI2Q96SN7 254 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 MAP7D2Q96T17 732 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 AP1M1Q9BXS5 423 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 PDCL3Q9H2J4 239 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 KCTD10Q9H3F6 313 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 BARX1Q9HBU1 254 aaPredicted RBP5.43□□□□□ -1.54
RTN4-215ENST00000491592 KIAA1586Q9HCI6 787 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 CD248Q9HCU0 757 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 LUC7LQ9NQ29 371 aaKnown RBP5.43□□□□□ -1.54
RTN4-215ENST00000491592 POGKQ9P215 609 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 CDC42EP3Q9UKI2 254 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 MAFFQ9ULX9 164 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 PCDHB6Q9Y5E3 794 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 ITIH6Q6UXX5 1313 aa5.43□□□□□ -1.54
RTN4-215ENST00000491592 GPRASP1Q5JY77 1395 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 IQGAP2Q13576 1575 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 CEP170Q5SW79 1584 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 LAMC3Q9Y6N6 1575 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 SCAPERQ9BY12 1400 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 A0A0A6YYJ9 748 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 A6NCN8 305 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 TRIM64CA6NLI5 447 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 J3KRW8 73 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 PRPF3O43395 683 aaKnown RBP5.42□□□□□ -1.54
RTN4-215ENST00000491592 FOXD2O60548 495 aaPredicted RBP5.42□□□□□ -1.54
RTN4-215ENST00000491592 TRIM13O60858 407 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 H2AFYO75367 372 aaKnown RBP5.42□□□□□ -1.54
RTN4-215ENST00000491592 IGHDP01880 384 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 LPLP06858 475 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 SETSIPP0DME0 302 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 XRCC6P12956 609 aaKnown RBP eCLIP5.42□□□□□ -1.54
RTN4-215ENST00000491592 SERPINB3P29508 390 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 CSF2RBP32927 897 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 PPARAQ07869 468 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 PRKG2Q13237 762 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 SMC1AQ14683 1233 aaKnown RBP5.42□□□□□ -1.54
RTN4-215ENST00000491592 EIF4HQ15056 248 aaKnown RBP5.42□□□□□ -1.54
RTN4-215ENST00000491592 UGT8Q16880 541 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 INAVAQ3KP66 663 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 TTC31Q49AM3 519 aaPredicted RBP5.42□□□□□ -1.54
RTN4-215ENST00000491592 RALYLQ86SE5 291 aaKnown RBP5.42□□□□□ -1.54
RTN4-215ENST00000491592 DAAM2Q86T65 1068 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 SNX32Q86XE0 403 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 KLHL36Q8N4N3 616 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 NAXEQ8NCW5 288 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 ACRBPQ8NEB7 543 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 AFAP1L1Q8TED9 768 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 ATP6V1E2Q96A05 226 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 TIFAQ96CG3 184 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 AJUBAQ96IF1 538 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 DYDC2Q96IM9 177 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 LCORQ96JN0 433 aaPredicted RBP5.42□□□□□ -1.54
RTN4-215ENST00000491592 PPM1MQ96MI6 270 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 NOL10Q9BSC4 688 aaKnown RBP5.42□□□□□ -1.54
RTN4-215ENST00000491592 KATNBL1Q9H079 304 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 QRSL1Q9H0R6 528 aaKnown RBP5.42□□□□□ -1.54
RTN4-215ENST00000491592 PRDM12Q9H4Q4 367 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 CHMP5Q9NZZ3 219 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 IP6K2Q9UHH9 426 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 ADAM29Q9UKF5 820 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 TMPRSS11EQ9UL52 423 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 EDARQ9UNE0 448 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 NUMBLQ9Y6R0 609 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 CROCC2H7BZ55 1655 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 ZNF608Q9ULD9 1512 aaPredicted RBP5.42□□□□□ -1.54
RTN4-215ENST00000491592 USP19O94966 1318 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 MYPNQ86TC9 1320 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 ZNF521Q96K83 1311 aa5.42□□□□□ -1.54
RTN4-215ENST00000491592 SHANK2Q9UPX8 1470 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 FZD9O00144 591 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 CHL1O00533 1208 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 ABLIM3O94929 683 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 AGR2O95994 175 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 ZNF888P0CJ79 500 aaPredicted RBP5.41□□□□□ -1.54
RTN4-215ENST00000491592 MYBL2P10244 700 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 IDEP14735 1019 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 CASQ1P31415 396 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 GPR3P46089 330 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 RXRGP48443 463 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 RRADP55042 308 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 SRSF2Q01130 221 aaKnown RBP5.41□□□□□ -1.54
RTN4-215ENST00000491592 SLFN5Q08AF3 891 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 KIAA2012Q0VF49 1180 aa5.41□□□□□ -1.54
RTN4-215ENST00000491592 TCIRG1Q13488 830 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms