RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 USP49Q70CQ1 688 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 RAD54LQ92698 747 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 SNX27Q96L92 541 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 UROC1Q96N76 676 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 CCSER1Q9C0I3 900 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 WDR6Q9NNW5 1121 aaKnown RBP19.71■□□□□ 0.75
HMGN1-219ENST00000491183 LARSQ9P2J5 1176 aaKnown RBP19.71■□□□□ 0.75
HMGN1-219ENST00000491183 ODF2LQ9ULJ1 636 aa19.71■□□□□ 0.75
HMGN1-219ENST00000491183 I3L4J1 428 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 N4BP1O75113 896 aaKnown RBP19.7■□□□□ 0.74
HMGN1-219ENST00000491183 KCNE1P15382 129 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 BRCC3P46736 316 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 SLC10A6Q3KNW5 377 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 SPECC1Q5M775 1068 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 ELMSAN1Q6PJG2 1045 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.7■□□□□ 0.74
HMGN1-219ENST00000491183 OTOP3Q7RTS5 596 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 HAUS6Q7Z4H7 955 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 SMG7Q92540 1137 aaKnown RBP19.7■□□□□ 0.74
HMGN1-219ENST00000491183 KCNN1Q92952 543 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 ACSF2Q96CM8 615 aaPredicted RBP19.7■□□□□ 0.74
HMGN1-219ENST00000491183 INTS4Q96HW7 963 aaKnown RBP19.7■□□□□ 0.74
HMGN1-219ENST00000491183 EPSTI1Q96J88 318 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 FOXD4L1Q9NU39 408 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 ZDHHC7Q9NXF8 308 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 CNTN3Q9P232 1028 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 ANKFY1Q9P2R3 1169 aa19.7■□□□□ 0.74
HMGN1-219ENST00000491183 ZMYND10O75800 440 aa19.69■□□□□ 0.74
HMGN1-219ENST00000491183 MARCKSP29966 332 aaPredicted RBP19.69■□□□□ 0.74
HMGN1-219ENST00000491183 ZNF131P52739 623 aa19.69■□□□□ 0.74
HMGN1-219ENST00000491183 MCL1Q07820 350 aa19.69■□□□□ 0.74
HMGN1-219ENST00000491183 MTMR3Q13615 1198 aa19.69■□□□□ 0.74
HMGN1-219ENST00000491183 RSPO2Q6UXX9 243 aaPredicted RBP19.69■□□□□ 0.74
HMGN1-219ENST00000491183 UBALD2Q8IYN6 164 aa19.69■□□□□ 0.74
HMGN1-219ENST00000491183 FBXL6Q8N531 539 aa19.69■□□□□ 0.74
HMGN1-219ENST00000491183 C18orf25Q96B23 403 aaPredicted RBP19.69■□□□□ 0.74
HMGN1-219ENST00000491183 PRKD2Q9BZL6 878 aa19.69■□□□□ 0.74
HMGN1-219ENST00000491183 FBXO2Q9UK22 296 aaPredicted RBP19.69■□□□□ 0.74
HMGN1-219ENST00000491183 FBXW11Q9UKB1 542 aa19.69■□□□□ 0.74
HMGN1-219ENST00000491183 DOCK6Q96HP0 2047 aa19.69■□□□□ 0.74
HMGN1-219ENST00000491183 CLDN3O15551 220 aa19.68■□□□□ 0.74
HMGN1-219ENST00000491183 PDGFBP01127 241 aaPredicted RBP19.68■□□□□ 0.74
HMGN1-219ENST00000491183 TKTP29401 623 aaKnown RBP19.68■□□□□ 0.74
HMGN1-219ENST00000491183 DDIT3P35638 169 aa19.68■□□□□ 0.74
HMGN1-219ENST00000491183 NOLC1Q14978 699 aaKnown RBP eCLIP19.68■□□□□ 0.74
HMGN1-219ENST00000491183 IER5LQ5T953 404 aa19.68■□□□□ 0.74
HMGN1-219ENST00000491183 PDXDC1Q6P996 788 aa19.68■□□□□ 0.74
HMGN1-219ENST00000491183 MYCT1Q8N699 235 aa19.68■□□□□ 0.74
HMGN1-219ENST00000491183 DDX27Q96GQ7 796 aaKnown RBP19.68■□□□□ 0.74
HMGN1-219ENST00000491183 FIZ1Q96SL8 496 aa19.68■□□□□ 0.74
HMGN1-219ENST00000491183 KCNH6Q9H252 994 aa19.68■□□□□ 0.74
HMGN1-219ENST00000491183 SLC38A7Q9NVC3 462 aa19.68■□□□□ 0.74
HMGN1-219ENST00000491183 MTRRQ9UBK8 725 aa19.68■□□□□ 0.74
HMGN1-219ENST00000491183 MTMR6Q9Y217 621 aa19.68■□□□□ 0.74
HMGN1-219ENST00000491183 PDCD11Q14690 1871 aaKnown RBP19.68■□□□□ 0.74
HMGN1-219ENST00000491183 CLUHO75153 1309 aa19.68■□□□□ 0.74
HMGN1-219ENST00000491183 H0YCG3 227 aa19.67■□□□□ 0.74
HMGN1-219ENST00000491183 K7ELQ4 463 aaPredicted RBP19.67■□□□□ 0.74
HMGN1-219ENST00000491183 PODXLO00592 558 aa19.67■□□□□ 0.74
HMGN1-219ENST00000491183 FAM13AO94988 1023 aa19.67■□□□□ 0.74
HMGN1-219ENST00000491183 OR1D2P34982 312 aa19.67■□□□□ 0.74
HMGN1-219ENST00000491183 RAB33AQ14088 237 aa19.67■□□□□ 0.74
HMGN1-219ENST00000491183 RASSF8Q8NHQ8 419 aa19.67■□□□□ 0.74
HMGN1-219ENST00000491183 LARP4BQ92615 738 aaKnown RBP19.67■□□□□ 0.74
HMGN1-219ENST00000491183 CLIC6Q96NY7 704 aa19.67■□□□□ 0.74
HMGN1-219ENST00000491183 MYADMQ96S97 322 aa19.67■□□□□ 0.74
HMGN1-219ENST00000491183 PIDD1Q9HB75 910 aa19.67■□□□□ 0.74
HMGN1-219ENST00000491183 PARVGQ9HBI0 331 aa19.67■□□□□ 0.74
HMGN1-219ENST00000491183 TBX20Q9UMR3 447 aa19.67■□□□□ 0.74
HMGN1-219ENST00000491183 SRPRBQ9Y5M8 271 aaKnown RBP19.67■□□□□ 0.74
HMGN1-219ENST00000491183 DOCK8Q8NF50 2099 aa19.66■□□□□ 0.74
HMGN1-219ENST00000491183 TRAPPC3O43617 180 aa19.66■□□□□ 0.74
HMGN1-219ENST00000491183 TRAK2O60296 914 aa19.66■□□□□ 0.74
HMGN1-219ENST00000491183 CEBPZQ03701 1054 aaKnown RBP19.66■□□□□ 0.74
HMGN1-219ENST00000491183 SUGP1Q8IWZ8 645 aaKnown RBP19.66■□□□□ 0.74
HMGN1-219ENST00000491183 TMEM130Q8N3G9 435 aa19.66■□□□□ 0.74
HMGN1-219ENST00000491183 KCNK12Q9HB15 430 aa19.66■□□□□ 0.74
HMGN1-219ENST00000491183 BACE2Q9Y5Z0 518 aa19.66■□□□□ 0.74
HMGN1-219ENST00000491183 KMT2EQ8IZD2 1858 aa19.66■□□□□ 0.74
HMGN1-219ENST00000491183 MUC6Q6W4X9 2439 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 TTC26A0AVF1 554 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 PIGRP01833 764 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 KRT18P05783 430 aaKnown RBP19.65■□□□□ 0.74
HMGN1-219ENST00000491183 C8AP07357 584 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 CXCL8P10145 99 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 GBP2P32456 591 aaPredicted RBP19.65■□□□□ 0.74
HMGN1-219ENST00000491183 RPL9P32969 192 aaKnown RBP19.65■□□□□ 0.74
HMGN1-219ENST00000491183 TNFSF9P41273 254 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 MATR3P43243 847 aaKnown RBP eCLIP19.65■□□□□ 0.74
HMGN1-219ENST00000491183 VCPP55072 806 aaKnown RBP19.65■□□□□ 0.74
HMGN1-219ENST00000491183 SPAG1Q07617 926 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 STAMQ92783 540 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 BICD1Q96G01 975 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 USP28Q96RU2 1077 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 ZHX3Q9H4I2 956 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 CDY1Q9Y6F8 540 aa19.65■□□□□ 0.74
HMGN1-219ENST00000491183 K7ENM7 598 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 FAM189A1O60320 539 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 CLTAP09496 248 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 NMT1P30419 496 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms