RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 HOXA3O43365 443 aaPredicted RBP2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 KCNQ2O43526 872 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 DNAJC6O75061 913 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 DNAJC8O75937 253 aaPredicted RBP2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 NDUFA10O95299 355 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 GNAI2P04899 355 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 GNAI3P08754 354 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 GYPEP15421 78 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 ATP2A2P16615 1042 aaKnown RBP2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 LAG3P18627 525 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 MX1P20591 662 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 PRKAR2BP31323 418 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 PDE1AP54750 535 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 INHBEP58166 350 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 HMGN5P82970 282 aaKnown RBP2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 APBA1Q02410 837 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 CD69Q07108 199 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 PPARAQ07869 468 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 SQSTM1Q13501 440 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 CUL4AQ13619 759 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 SPIDRQ14159 915 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 FAM214AQ32MH5 1076 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 CT47A1Q5JQC4 288 aaPredicted RBP2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 CCDC30Q5VVM6 783 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 DPY19L2P1Q6NXN4 242 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 EFCAB12Q6NXP0 572 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 CCDC62Q6P9F0 684 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 FAM180AQ6UWF9 173 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 CLEC14AQ86T13 490 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 LRRTM3Q86VH5 581 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 XYLT1Q86Y38 959 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 CMTR2Q8IYT2 770 aaKnown RBP2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 TSPYL6Q8N831 410 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 CDYL2Q8N8U2 506 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 UBXN4Q92575 508 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 CHMP4CQ96CF2 233 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 COG3Q96JB2 828 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 PDLIM2Q96JY6 352 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 C16orf92Q96LL3 132 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 ZSCAN31Q96LW9 406 aaPredicted RBP2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 PRAM1Q96QH2 718 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 UHRF1Q96T88 793 aaPredicted RBP2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 PANK2Q9BZ23 570 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 KANSL2Q9H9L4 492 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 RSAD1Q9HA92 442 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 INTS7Q9NVH2 962 aaKnown RBP2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 PCDHB6Q9Y5E3 794 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 IFT172Q9UG01 1749 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 CLTCL1P53675 1640 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 MYO3AQ8NEV4 1616 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 LMTK2Q8IWU2 1503 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 NOS1P29475 1434 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 ARHGAP31Q2M1Z3 1444 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 NCOA3Q9Y6Q9 1424 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 PPLO60437 1756 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 MYOM1P52179 1685 aa2.41□□□□□ -2.02
SNRNP40-207ENST00000491106 DLG5Q8TDM6 1919 aa2.4□□□□□ -2.02
SNRNP40-207ENST00000491106 MLH3Q9UHC1 1453 aa2.4□□□□□ -2.02
SNRNP40-207ENST00000491106 AATKQ6ZMQ8 1374 aa2.4□□□□□ -2.02
SNRNP40-207ENST00000491106 PIK3R4Q99570 1358 aa2.4□□□□□ -2.02
SNRNP40-207ENST00000491106 SETD1BQ9UPS6 1966 aaKnown RBP2.4□□□□□ -2.02
SNRNP40-207ENST00000491106 ZCCHC11Q5TAX3 1644 aaKnown RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 USP32Q8NFA0 1604 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 KRTAP23-1A1A580 65 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 ZNF891A8MT65 544 aaPredicted RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 OPHN1O60890 802 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 PPFIA4O75335 1185 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 STC2O76061 302 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 RHOBTB3O94955 611 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 CLSTN1O94985 981 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 F2P00734 622 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 GCP02774 474 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 HLA-DOAP06340 250 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 HMOX1P09601 288 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 MYCLP1P12525 358 aaPredicted RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 PTPN7P35236 360 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 MECP2P51608 486 aaKnown RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 MYBPC3Q14896 1274 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 PCBP1Q15365 356 aaKnown RBP eCLIP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 TAF7Q15545 349 aaPredicted RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 DDB1Q16531 1140 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 ERCC6LQ2NKX8 1250 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 ZSCAN23Q3MJ62 389 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 SPDYE7PQ495Y7 208 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 ATP13A4Q4VNC1 1196 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 HSP90AB4PQ58FF6 505 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 STRIP1Q5VSL9 837 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 FRMD7Q6ZUT3 714 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 C16orf86Q6ZW13 317 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 PDZD4Q76G19 769 aaPredicted RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 TICAM2Q86XR7 235 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 VRK3Q8IV63 474 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 NIM1KQ8IY84 436 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 SYNPOQ8N3V7 929 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 CACTINQ8WUQ7 758 aaKnown RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 RUFY2Q8WXA3 655 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 ZNF496Q96IT1 587 aaPredicted RBP2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 TMX3Q96JJ7 454 aa2.4□□□□□ -2.03
SNRNP40-207ENST00000491106 PRRX2Q99811 253 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms