RNA–Protein interactions for RNA: ENST00000490812.5

PTPN18-215, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-215ENST00000490812 SORCS3Q9UPU3 1222 aa23.3■■□□□ 1.32
PTPN18-215ENST00000490812 MORC2Q9Y6X9 1032 aaPredicted RBP23.3■■□□□ 1.32
PTPN18-215ENST00000490812 PDCD11Q14690 1871 aaKnown RBP23.3■■□□□ 1.32
PTPN18-215ENST00000490812 CLDN3O15551 220 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 FAM13AO94988 1023 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 FGFR3P22607 806 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 ABCD1P33897 745 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 MTMR3Q13615 1198 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 DHX8Q14562 1220 aaKnown RBP23.29■■□□□ 1.32
PTPN18-215ENST00000490812 MCM6Q14566 821 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 GLYCTKQ8IVS8 523 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 UBALD2Q8IYN6 164 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 KREMEN2Q8NCW0 462 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 FAM122AQ96E09 287 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 ZBTB45Q96K62 511 aaPredicted RBP23.29■■□□□ 1.32
PTPN18-215ENST00000490812 KCNH6Q9H252 994 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 FBXO2Q9UK22 296 aaPredicted RBP23.29■■□□□ 1.32
PTPN18-215ENST00000490812 MTMR6Q9Y217 621 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 SRPRBQ9Y5M8 271 aaKnown RBP23.29■■□□□ 1.32
PTPN18-215ENST00000490812 ZDBF2Q9HCK1 2354 aa23.29■■□□□ 1.32
PTPN18-215ENST00000490812 RFPL2O75678 378 aa23.28■■□□□ 1.32
PTPN18-215ENST00000490812 KRT18P05783 430 aaKnown RBP23.28■■□□□ 1.32
PTPN18-215ENST00000490812 SPATA31D3P0C874 917 aa23.28■■□□□ 1.32
PTPN18-215ENST00000490812 HARSP12081 509 aaKnown RBP23.28■■□□□ 1.32
PTPN18-215ENST00000490812 DDIT3P35638 169 aa23.28■■□□□ 1.32
PTPN18-215ENST00000490812 SPATA31D4Q6ZUB0 917 aa23.28■■□□□ 1.32
PTPN18-215ENST00000490812 MYCT1Q8N699 235 aa23.28■■□□□ 1.32
PTPN18-215ENST00000490812 ZMAT2Q96NC0 199 aaKnown RBP23.28■■□□□ 1.32
PTPN18-215ENST00000490812 CLSTN3Q9BQT9 956 aa23.28■■□□□ 1.32
PTPN18-215ENST00000490812 ZSCAN16Q9H4T2 348 aaPredicted RBP23.28■■□□□ 1.32
PTPN18-215ENST00000490812 GOLGA2P5Q9HBQ8 144 aa23.28■■□□□ 1.32
PTPN18-215ENST00000490812 WDR6Q9NNW5 1121 aaKnown RBP23.28■■□□□ 1.32
PTPN18-215ENST00000490812 FBXW11Q9UKB1 542 aa23.28■■□□□ 1.32
PTPN18-215ENST00000490812 GTF3C3Q9Y5Q9 886 aa23.28■■□□□ 1.32
PTPN18-215ENST00000490812 TBCAO75347 108 aaKnown RBP23.27■■□□□ 1.32
PTPN18-215ENST00000490812 MARCKSP29966 332 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-215ENST00000490812 RPL9P32969 192 aaKnown RBP23.27■■□□□ 1.32
PTPN18-215ENST00000490812 SOX4Q06945 474 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-215ENST00000490812 KYAT1Q16773 422 aa23.27■■□□□ 1.32
PTPN18-215ENST00000490812 CD300LGQ6UXG3 332 aa23.27■■□□□ 1.32
PTPN18-215ENST00000490812 SMG7Q92540 1137 aaKnown RBP23.27■■□□□ 1.32
PTPN18-215ENST00000490812 STAMQ92783 540 aa23.27■■□□□ 1.32
PTPN18-215ENST00000490812 PBXIP1Q96AQ6 731 aa23.27■■□□□ 1.32
PTPN18-215ENST00000490812 ZNF707Q96C28 371 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-215ENST00000490812 ASIC4Q96FT7 647 aa23.27■■□□□ 1.32
PTPN18-215ENST00000490812 BICD1Q96G01 975 aa23.27■■□□□ 1.32
PTPN18-215ENST00000490812 EPSTI1Q96J88 318 aa23.27■■□□□ 1.32
PTPN18-215ENST00000490812 STK17AQ9UEE5 414 aa23.27■■□□□ 1.32
PTPN18-215ENST00000490812 CCDC39Q9UFE4 941 aa23.27■■□□□ 1.32
PTPN18-215ENST00000490812 TBX20Q9UMR3 447 aa23.27■■□□□ 1.32
PTPN18-215ENST00000490812 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-215ENST00000490812 CLUHO75153 1309 aa23.27■■□□□ 1.32
PTPN18-215ENST00000490812 K7ENM7 598 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 STX6O43752 255 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 TRAK2O60296 914 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 ZMYND10O75800 440 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 PIGRP01833 764 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 TXLNAP40222 546 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 LIG4P49917 911 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 FAM173BQ6P4H8 233 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 C3orf58Q8NDZ4 430 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 SNX21Q969T3 373 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 PRKD2Q9BZL6 878 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 PLEKHA5Q9HAU0 1116 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 MTRRQ9UBK8 725 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 LIMD1Q9UGP4 676 aa23.26■■□□□ 1.31
PTPN18-215ENST00000490812 PODXLO00592 558 aa23.25■■□□□ 1.31
PTPN18-215ENST00000490812 HNRNPDLO14979 420 aaKnown RBP23.25■■□□□ 1.31
PTPN18-215ENST00000490812 MEFVO15553 781 aaPredicted RBP23.25■■□□□ 1.31
PTPN18-215ENST00000490812 CLTAP09496 248 aa23.25■■□□□ 1.31
PTPN18-215ENST00000490812 MATR3P43243 847 aaKnown RBP eCLIP23.25■■□□□ 1.31
PTPN18-215ENST00000490812 RAB33AQ14088 237 aa23.25■■□□□ 1.31
PTPN18-215ENST00000490812 SLC10A6Q3KNW5 377 aa23.25■■□□□ 1.31
PTPN18-215ENST00000490812 LIN9Q5TKA1 542 aa23.25■■□□□ 1.31
PTPN18-215ENST00000490812 ANKS3Q6ZW76 656 aa23.25■■□□□ 1.31
PTPN18-215ENST00000490812 USP49Q70CQ1 688 aa23.25■■□□□ 1.31
PTPN18-215ENST00000490812 SUGP1Q8IWZ8 645 aaKnown RBP23.25■■□□□ 1.31
PTPN18-215ENST00000490812 PIDD1Q9HB75 910 aa23.25■■□□□ 1.31
PTPN18-215ENST00000490812 BACE2Q9Y5Z0 518 aa23.25■■□□□ 1.31
PTPN18-215ENST00000490812 HNRNPA1P09651 372 aaKnown RBP eCLIP23.24■■□□□ 1.31
PTPN18-215ENST00000490812 MYBP10242 640 aa23.24■■□□□ 1.31
PTPN18-215ENST00000490812 IGFBP6P24592 240 aaPredicted RBP23.24■■□□□ 1.31
PTPN18-215ENST00000490812 HOXA9P31269 272 aa23.24■■□□□ 1.31
PTPN18-215ENST00000490812 SLC39A14Q15043 492 aa23.24■■□□□ 1.31
PTPN18-215ENST00000490812 SPECC1Q5M775 1068 aa23.24■■□□□ 1.31
PTPN18-215ENST00000490812 FBXL6Q8N531 539 aa23.24■■□□□ 1.31
PTPN18-215ENST00000490812 KRI1Q8N9T8 703 aaKnown RBP23.24■■□□□ 1.31
PTPN18-215ENST00000490812 FIZ1Q96SL8 496 aa23.24■■□□□ 1.31
PTPN18-215ENST00000490812 HAPLN2Q9GZV7 340 aa23.24■■□□□ 1.31
PTPN18-215ENST00000490812 ZHX3Q9H4I2 956 aa23.24■■□□□ 1.31
PTPN18-215ENST00000490812 FOXD4L1Q9NU39 408 aa23.24■■□□□ 1.31
PTPN18-215ENST00000490812 MYH15Q9Y2K3 1946 aa23.23■■□□□ 1.31
PTPN18-215ENST00000490812 ASGR2P07307 311 aa23.23■■□□□ 1.31
PTPN18-215ENST00000490812 TKTP29401 623 aaKnown RBP23.23■■□□□ 1.31
PTPN18-215ENST00000490812 OR1D2P34982 312 aa23.23■■□□□ 1.31
PTPN18-215ENST00000490812 BRCC3P46736 316 aa23.23■■□□□ 1.31
PTPN18-215ENST00000490812 GTF2BQ00403 316 aa23.23■■□□□ 1.31
PTPN18-215ENST00000490812 CEBPZQ03701 1054 aaKnown RBP23.23■■□□□ 1.31
PTPN18-215ENST00000490812 SEZ6Q53EL9 994 aa23.23■■□□□ 1.31
PTPN18-215ENST00000490812 USP28Q96RU2 1077 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms