RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 BEND6Q5SZJ8 279 aaPredicted RBP5.51□□□□□ -1.53
PTPRK-213ENST00000490332 PDXDC1Q6P996 788 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 LRRC55Q6ZSA7 311 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 KCTD1Q719H9 257 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 RRAGAQ7L523 313 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 FAM160B2Q86V87 743 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 VPS36Q86VN1 386 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 MMGT1Q8N4V1 131 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 SYT2Q8N9I0 419 aaPredicted RBP5.51□□□□□ -1.53
PTPRK-213ENST00000490332 LRRN4CLQ8ND94 238 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 TRPV1Q8NER1 839 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 GOLGA5Q8TBA6 731 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 CAGE1Q8TC20 777 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 CRYGNQ8WXF5 182 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 EXOC4Q96A65 974 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 ABHD17AQ96GS6 310 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 NOX5Q96PH1 765 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 SLC9A7Q96T83 725 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 IFIH1Q9BYX4 1025 aaKnown RBP5.51□□□□□ -1.53
PTPRK-213ENST00000490332 ANKZF1Q9H8Y5 726 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 GOPCQ9HD26 462 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 ZFP64Q9NPA5 681 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 MED4Q9NPJ6 270 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 PLCB1Q9NQ66 1216 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 STARD7Q9NQZ5 370 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 GINM1Q9NU53 330 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 AGPAT5Q9NUQ2 364 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 MAP3K20Q9NYL2 800 aaKnown RBP5.51□□□□□ -1.53
PTPRK-213ENST00000490332 AIPL1Q9NZN9 384 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 KCND2Q9NZV8 630 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 SEL1LQ9UBV2 794 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 PUF60Q9UHX1 559 aaKnown RBP5.51□□□□□ -1.53
PTPRK-213ENST00000490332 FBXL5Q9UKA1 691 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 ATXN7L1Q9ULK2 861 aaPredicted RBP5.51□□□□□ -1.53
PTPRK-213ENST00000490332 L1RE1Q9UN81 338 aa5.51□□□□□ -1.53
PTPRK-213ENST00000490332 MRPL11Q9Y3B7 192 aaKnown RBP5.51□□□□□ -1.53
PTPRK-213ENST00000490332 REXO2Q9Y3B8 237 aaKnown RBP5.51□□□□□ -1.53
PTPRK-213ENST00000490332 ATP8B3O60423 1300 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 UBE4BO95155 1302 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 MYH4Q9Y623 1939 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 SMCHD1A6NHR9 2005 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 GTPBP10A4D1E9 387 aaKnown RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 USP17L15C9J2P7 530 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 USP17L13C9JLJ4 530 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 USP17L11C9JVI0 530 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 USP17L18D6R9N7 530 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 USP17L22D6RA61 530 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 USP17L17D6RBQ6 530 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 USP17L19D6RCP7 530 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 USP17L20D6RJB6 530 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 E9PMD0 336 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 H3BQ06 376 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 GCOM1H8Y6P7 765 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 CES2O00748 559 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 MEIS2O14770 477 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 EIF3DO15371 548 aaKnown RBP eCLIP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 NCK2O43639 380 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 BNIP3LO60238 219 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 CTNND1O60716 968 aaKnown RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 TBCAO75347 108 aaKnown RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 POLR2MP0CAP2 368 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 RARBP10826 455 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 CYP11B2P19099 503 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 FGFR3P22607 806 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 CYP2C19P33261 490 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 SCTRP47872 440 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 KIF11P52732 1056 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 CACNB3P54284 484 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 SNRPFP62306 86 aaKnown RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 USP17L24Q0WX57 530 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 IKQ13123 557 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 ALCAMQ13740 583 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 GIT2Q14161 759 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 LBRQ14739 615 aaKnown RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 SMAD2Q15796 467 aaKnown RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 CLUL1Q15846 466 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 KNOP1Q1ED39 458 aaKnown RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 BMT2Q1RMZ1 405 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 PRR16Q569H4 304 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 FAM83BQ5T0W9 1011 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 CCDC181Q5TID7 509 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 OLFML2BQ68BL8 750 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 USP17L6PQ6QN14 398 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 ZNF572Q7Z3I7 529 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 TRIM59Q8IWR1 403 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 ETNPPLQ8TBG4 499 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 FAM71BQ8TC56 605 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 PHOSPHO2Q8TCD6 241 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 LRRC15Q8TF66 581 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 PABPC5Q96DU9 382 aaKnown RBP5.5□□□□□ -1.53
PTPRK-213ENST00000490332 TRIM11Q96F44 468 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 NACC1Q96RE7 527 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 HINFPQ9BQA5 517 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 MKNK1Q9BUB5 465 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 WDR11Q9BZH6 1224 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 KCTD10Q9H3F6 313 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 ABCB6Q9NP58 842 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 JADE2Q9NQC1 790 aa5.5□□□□□ -1.53
PTPRK-213ENST00000490332 TYW1Q9NV66 732 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms