RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ALKAL1Q6UXT8 129 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 CYP26C1Q6V0L0 522 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 CCDC149Q6ZUS6 474 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 USP49Q70CQ1 688 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 KCNN1Q92952 543 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 CDH22Q9UJ99 828 aa19.06■□□□□ 0.64
SEC13-218ENST00000490283 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.06■□□□□ 0.64
SEC13-218ENST00000490283 CLTAP09496 248 aa19.05■□□□□ 0.64
SEC13-218ENST00000490283 RPL17P18621 184 aaKnown RBP19.05■□□□□ 0.64
SEC13-218ENST00000490283 UPP1Q16831 310 aa19.05■□□□□ 0.64
SEC13-218ENST00000490283 KANK3Q6NY19 840 aa19.05■□□□□ 0.64
SEC13-218ENST00000490283 PRSS55Q6UWB4 352 aaPredicted RBP19.05■□□□□ 0.64
SEC13-218ENST00000490283 DYMQ7RTS9 669 aa19.05■□□□□ 0.64
SEC13-218ENST00000490283 PLCD3Q8N3E9 789 aa19.05■□□□□ 0.64
SEC13-218ENST00000490283 CMASQ8NFW8 434 aaPredicted RBP19.05■□□□□ 0.64
SEC13-218ENST00000490283 EDAQ92838 391 aa19.05■□□□□ 0.64
SEC13-218ENST00000490283 ACSF2Q96CM8 615 aaPredicted RBP19.05■□□□□ 0.64
SEC13-218ENST00000490283 GOLGA2P5Q9HBQ8 144 aa19.05■□□□□ 0.64
SEC13-218ENST00000490283 C11orf16Q9NQ32 467 aa19.05■□□□□ 0.64
SEC13-218ENST00000490283 USTQ9Y2C2 406 aa19.05■□□□□ 0.64
SEC13-218ENST00000490283 NUB1Q9Y5A7 615 aa19.05■□□□□ 0.64
SEC13-218ENST00000490283 CCDC195A0A1B0GUA6 201 aa19.04■□□□□ 0.64
SEC13-218ENST00000490283 PODXLO00592 558 aa19.04■□□□□ 0.64
SEC13-218ENST00000490283 SPTLC2O15270 562 aa19.04■□□□□ 0.64
SEC13-218ENST00000490283 TGM5O43548 720 aa19.04■□□□□ 0.64
SEC13-218ENST00000490283 RPL9P32969 192 aaKnown RBP19.04■□□□□ 0.64
SEC13-218ENST00000490283 PPP2R3AQ06190 1150 aa19.04■□□□□ 0.64
SEC13-218ENST00000490283 FOXD4L5Q5VV16 416 aaPredicted RBP19.04■□□□□ 0.64
SEC13-218ENST00000490283 LINC00301Q8NCQ3 95 aa19.04■□□□□ 0.64
SEC13-218ENST00000490283 FOXD4L4Q8WXT5 416 aaPredicted RBP19.04■□□□□ 0.64
SEC13-218ENST00000490283 DDX12PQ92771 950 aa19.04■□□□□ 0.64
SEC13-218ENST00000490283 PLEKHA5Q9HAU0 1116 aa19.04■□□□□ 0.64
SEC13-218ENST00000490283 PIDD1Q9HB75 910 aa19.04■□□□□ 0.64
SEC13-218ENST00000490283 SEL1LQ9UBV2 794 aa19.04■□□□□ 0.64
SEC13-218ENST00000490283 C2CD4DB7Z1M9 353 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 XPOTO43592 962 aaKnown RBP19.03■□□□□ 0.64
SEC13-218ENST00000490283 PIGRP01833 764 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 SPATA31D3P0C874 917 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 MYBP10242 640 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 GAP43P17677 238 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 NMT1P30419 496 aaKnown RBP19.03■□□□□ 0.64
SEC13-218ENST00000490283 PTPN21Q16825 1174 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 SEZ6Q53EL9 994 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 LIN9Q5TKA1 542 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 SPATA31D4Q6ZUB0 917 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 ANKS3Q6ZW76 656 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 OTOP3Q7RTS5 596 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 MAP4K3Q8IVH8 894 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 KREMEN2Q8NCW0 462 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 LNX1Q8TBB1 728 aaPredicted RBP19.03■□□□□ 0.64
SEC13-218ENST00000490283 SMG7Q92540 1137 aaKnown RBP19.03■□□□□ 0.64
SEC13-218ENST00000490283 STAMQ92783 540 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 ZMAT2Q96NC0 199 aaKnown RBP19.03■□□□□ 0.64
SEC13-218ENST00000490283 MSTO1Q9BUK6 570 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 ZDHHC7Q9NXF8 308 aa19.03■□□□□ 0.64
SEC13-218ENST00000490283 OGTO15294 1046 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 PPP6R2O75170 966 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 YEATS4O95619 227 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 ZSCAN22P10073 491 aaPredicted RBP19.02■□□□□ 0.64
SEC13-218ENST00000490283 CXCL8P10145 99 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 FGFR3P22607 806 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 ZXDAP98168 799 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 GTF2BQ00403 316 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 SOX4Q06945 474 aaPredicted RBP19.02■□□□□ 0.64
SEC13-218ENST00000490283 SLC10A6Q3KNW5 377 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 SLFN12LQ6IEE8 588 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 SFR1Q86XK3 245 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 HVCN1Q96D96 273 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 KIF12Q96FN5 646 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 RHOBTB2Q9BYZ6 727 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 PANK2Q9BZ23 570 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 LRRC27Q9C0I9 530 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 MRPL44Q9H9J2 332 aaKnown RBP19.02■□□□□ 0.64
SEC13-218ENST00000490283 RPF1Q9H9Y2 349 aaKnown RBP19.02■□□□□ 0.64
SEC13-218ENST00000490283 TFIP11Q9UBB9 837 aaKnown RBP19.02■□□□□ 0.64
SEC13-218ENST00000490283 MYH11P35749 1972 aa19.02■□□□□ 0.64
SEC13-218ENST00000490283 RFPL2O75678 378 aa19.01■□□□□ 0.63
SEC13-218ENST00000490283 IDEP14735 1019 aa19.01■□□□□ 0.63
SEC13-218ENST00000490283 LILRA6Q6PI73 481 aa19.01■□□□□ 0.63
SEC13-218ENST00000490283 ZDHHC14Q8IZN3 488 aa19.01■□□□□ 0.63
SEC13-218ENST00000490283 PDILTQ8N807 584 aa19.01■□□□□ 0.63
SEC13-218ENST00000490283 C18orf25Q96B23 403 aaPredicted RBP19.01■□□□□ 0.63
SEC13-218ENST00000490283 TSPAN18Q96SJ8 248 aa19.01■□□□□ 0.63
SEC13-218ENST00000490283 CLSTN3Q9BQT9 956 aa19.01■□□□□ 0.63
SEC13-218ENST00000490283 ST6GALNAC4Q9H4F1 302 aa19.01■□□□□ 0.63
SEC13-218ENST00000490283 MTRRQ9UBK8 725 aa19.01■□□□□ 0.63
SEC13-218ENST00000490283 EXOC7Q9UPT5 735 aa19.01■□□□□ 0.63
SEC13-218ENST00000490283 MYMKA6NI61 221 aa19■□□□□ 0.63
SEC13-218ENST00000490283 SYN3O14994 580 aa19■□□□□ 0.63
SEC13-218ENST00000490283 CUTAO60888 179 aa19■□□□□ 0.63
SEC13-218ENST00000490283 ZMYND10O75800 440 aa19■□□□□ 0.63
SEC13-218ENST00000490283 F13A1P00488 732 aa19■□□□□ 0.63
SEC13-218ENST00000490283 TKTP29401 623 aaKnown RBP19■□□□□ 0.63
SEC13-218ENST00000490283 MCM4P33991 863 aa19■□□□□ 0.63
SEC13-218ENST00000490283 OR1D2P34982 312 aa19■□□□□ 0.63
SEC13-218ENST00000490283 BRCC3P46736 316 aa19■□□□□ 0.63
SEC13-218ENST00000490283 MTMR3Q13615 1198 aa19■□□□□ 0.63
SEC13-218ENST00000490283 ZC2HC1CQ53FD0 456 aaPredicted RBP19■□□□□ 0.63
SEC13-218ENST00000490283 PPM1LQ5SGD2 360 aa19■□□□□ 0.63
SEC13-218ENST00000490283 TRIM67Q6ZTA4 783 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms