RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 CMTR2Q8IYT2 770 aaKnown RBP6.44□□□□□ -1.38
PTPN4-212ENST00000488896 PRPF38AQ8NAV1 312 aaKnown RBP6.44□□□□□ -1.38
PTPN4-212ENST00000488896 AGAP2Q99490 1192 aa6.44□□□□□ -1.38
PTPN4-212ENST00000488896 SERHL2Q9H4I8 314 aa6.44□□□□□ -1.38
PTPN4-212ENST00000488896 MANSC1Q9H8J5 431 aa6.44□□□□□ -1.38
PTPN4-212ENST00000488896 FBXO34Q9NWN3 711 aa6.44□□□□□ -1.38
PTPN4-212ENST00000488896 SLC23A1Q9UHI7 598 aa6.44□□□□□ -1.38
PTPN4-212ENST00000488896 PCDHA13Q9Y5I0 950 aa6.44□□□□□ -1.38
PTPN4-212ENST00000488896 MYBBP1AQ9BQG0 1328 aaKnown RBP6.44□□□□□ -1.38
PTPN4-212ENST00000488896 TCRBV7S2A1N4TA0A589 114 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 KLHL33A6NCF5 533 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 TMEM200CA6NKL6 621 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 B3GALT2O43825 422 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 HLA-DOAP06340 250 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 DDCP20711 480 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 C5AR1P21730 350 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 GUCY1B3Q02153 619 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 TP53BP2Q13625 1128 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 PCBP2Q15366 365 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPN4-212ENST00000488896 INAVAQ3KP66 663 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 RHOT2Q8IXI1 618 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 LCORLQ8N3X6 602 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 BEND2Q8NDZ0 799 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 GPR150Q8NGU9 434 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 CYFIP2Q96F07 1278 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 FUBP3Q96I24 572 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPN4-212ENST00000488896 REXO4Q9GZR2 422 aaKnown RBP6.43□□□□□ -1.38
PTPN4-212ENST00000488896 KLHL11Q9NVR0 708 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 SAP30BPQ9UHR5 308 aaKnown RBP6.43□□□□□ -1.38
PTPN4-212ENST00000488896 TUBD1Q9UJT1 453 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 AATKQ6ZMQ8 1374 aa6.43□□□□□ -1.38
PTPN4-212ENST00000488896 KIAA0391O15091 583 aaKnown RBP6.42□□□□□ -1.38
PTPN4-212ENST00000488896 TEX33O43247 280 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 PCDHGA12O60330 932 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 PRSS23O95084 383 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 GCP02774 474 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 ZEB1P37275 1124 aaPredicted RBP6.42□□□□□ -1.38
PTPN4-212ENST00000488896 CREMQ03060 361 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 MTM1Q13496 603 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 OTUD7BQ6GQQ9 843 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 RSPH3Q86UC2 560 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 MAPKAPK5Q8IW41 473 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 ARHGEF19Q8IW93 802 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 CASKIN2Q8WXE0 1202 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 ADAM2Q99965 735 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 RNF181Q9P0P0 153 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 PCDHGA9Q9Y5G4 932 aaKnown RBP6.42□□□□□ -1.38
PTPN4-212ENST00000488896 PCDHGA8Q9Y5G5 932 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 PCDHGA7Q9Y5G6 932 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 PCDHGA6Q9Y5G7 932 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 PCDHGA3Q9Y5H0 932 aa6.42□□□□□ -1.38
PTPN4-212ENST00000488896 MXRA7P84157 204 aa6.41□□□□□ -1.38
PTPN4-212ENST00000488896 KIF23Q02241 960 aaPredicted RBP6.41□□□□□ -1.38
PTPN4-212ENST00000488896 HECTD2Q5U5R9 776 aa6.41□□□□□ -1.38
PTPN4-212ENST00000488896 PCSK4Q6UW60 755 aa6.41□□□□□ -1.38
PTPN4-212ENST00000488896 MIGA2Q7L4E1 593 aa6.41□□□□□ -1.38
PTPN4-212ENST00000488896 PNMA8AQ86V59 439 aaPredicted RBP6.41□□□□□ -1.38
PTPN4-212ENST00000488896 RNF31Q96EP0 1072 aa6.41□□□□□ -1.38
PTPN4-212ENST00000488896 TMX3Q96JJ7 454 aa6.41□□□□□ -1.38
PTPN4-212ENST00000488896 SMAD5Q99717 465 aaKnown RBP6.41□□□□□ -1.38
PTPN4-212ENST00000488896 GSTO2Q9H4Y5 243 aa6.41□□□□□ -1.38
PTPN4-212ENST00000488896 TDP1Q9NUW8 608 aa6.41□□□□□ -1.38
PTPN4-212ENST00000488896 NOX1Q9Y5S8 564 aa6.41□□□□□ -1.38
PTPN4-212ENST00000488896 MRFAP1Q9Y605 127 aa6.41□□□□□ -1.38
PTPN4-212ENST00000488896 A0A1B0GTW7 788 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 CCDC78A2IDD5 438 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 GRID2IPA4D2P6 1211 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 CDHR4A6H8M9 788 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 GABRDO14764 452 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 SPDEFO95238 335 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 CFIP05156 583 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 ELANEP08246 267 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 BMPR1AP36894 532 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 SLC16A1P53985 500 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 USP14P54578 494 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 INHBEP58166 350 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 HSD11B2P80365 405 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 OCA2Q04671 838 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 IL10RAQ13651 578 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 SMN1Q16637 294 aaKnown RBP6.4□□□□□ -1.38
PTPN4-212ENST00000488896 SPDYE7PQ495Y7 208 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 SEM1Q6ZVN7 128 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 SSH1Q8WYL5 1049 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 ZG16BQ96DA0 208 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 ALOXE3Q9BYJ1 711 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 USP25Q9UHP3 1055 aa6.4□□□□□ -1.38
PTPN4-212ENST00000488896 SHTN1A0MZ66 631 aa6.39□□□□□ -1.39
PTPN4-212ENST00000488896 CDKL5O76039 1030 aa6.39□□□□□ -1.39
PTPN4-212ENST00000488896 FGFR4P22455 802 aa6.39□□□□□ -1.39
PTPN4-212ENST00000488896 TARDBPQ13148 414 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTPN4-212ENST00000488896 PTPN21Q16825 1174 aa6.39□□□□□ -1.39
PTPN4-212ENST00000488896 Q6YL49 198 aa6.39□□□□□ -1.39
PTPN4-212ENST00000488896 TMEM132CQ8N3T6 1108 aa6.39□□□□□ -1.39
PTPN4-212ENST00000488896 SUPT20HQ8NEM7 779 aa6.39□□□□□ -1.39
PTPN4-212ENST00000488896 TBC1D15Q8TC07 691 aa6.39□□□□□ -1.39
PTPN4-212ENST00000488896 ASB10Q8WXI3 467 aa6.39□□□□□ -1.39
PTPN4-212ENST00000488896 CAVIN3Q969G5 261 aa6.39□□□□□ -1.39
PTPN4-212ENST00000488896 HDAC10Q969S8 669 aa6.39□□□□□ -1.39
PTPN4-212ENST00000488896 MARS2Q96GW9 593 aaKnown RBP6.39□□□□□ -1.39
PTPN4-212ENST00000488896 TEKT5Q96M29 485 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms