RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ZNF341Q9BYN7 854 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 FAM30AQ9NZY2 134 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 CALCOCO1Q9P1Z2 691 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 TCEAL9Q9UHQ7 104 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 PCDHGA9Q9Y5G4 932 aaKnown RBP5.63□□□□□ -1.51
ITGB1-214ENST00000488427 PCDHGA8Q9Y5G5 932 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 PCDHGA7Q9Y5G6 932 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 PCDHGA6Q9Y5G7 932 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 PCDHGA3Q9Y5H0 932 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 XDHP47989 1333 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 MYBBP1AQ9BQG0 1328 aaKnown RBP5.63□□□□□ -1.51
ITGB1-214ENST00000488427 ZMYM3Q14202 1370 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 MROH2BQ7Z745 1585 aa5.63□□□□□ -1.51
ITGB1-214ENST00000488427 CCDC154A6NI56 674 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 CXorf49A8MYA2 514 aaPredicted RBP5.62□□□□□ -1.51
ITGB1-214ENST00000488427 MTHFD1P11586 935 aaKnown RBP5.62□□□□□ -1.51
ITGB1-214ENST00000488427 CTXN1P60606 82 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 PIN1Q13526 163 aaPredicted RBP5.62□□□□□ -1.51
ITGB1-214ENST00000488427 MIIPQ5JXC2 388 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 MFSD14BQ5SR56 506 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 SEM1Q6ZVN7 128 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 CMTR2Q8IYT2 770 aaKnown RBP5.62□□□□□ -1.51
ITGB1-214ENST00000488427 EXTL1Q92935 676 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 PGBD4Q96DM1 585 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 SLC46A2Q9BY10 475 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 KCNH6Q9H252 994 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 KMT5AQ9NQR1 393 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 TUBD1Q9UJT1 453 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 PNMA8BQ9ULN7 279 aaPredicted RBP5.62□□□□□ -1.51
ITGB1-214ENST00000488427 KIF21BO75037 1637 aa5.62□□□□□ -1.51
ITGB1-214ENST00000488427 WDR97A6NE52 1622 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 RNASET2O00584 256 aaKnown RBP5.61□□□□□ -1.51
ITGB1-214ENST00000488427 HTRA2O43464 458 aaPredicted RBP5.61□□□□□ -1.51
ITGB1-214ENST00000488427 SCAF4O95104 1147 aaKnown RBP5.61□□□□□ -1.51
ITGB1-214ENST00000488427 SMARCA1P28370 1054 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 MCM7P33993 719 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 IL12RB1P42701 662 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 RAP2BP61225 183 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 ABCC8Q09428 1581 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 MTM1Q13496 603 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 TUBA3CQ13748 450 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 SEPT2Q15019 361 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 TUBA3EQ6PEY2 450 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 DNMBPQ6XZF7 1577 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 SPRED1Q7Z699 444 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 XYLT1Q86Y38 959 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 REPS2Q8NFH8 660 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 IL17DQ8TAD2 202 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 CPT1CQ8TCG5 803 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 SLC25A43Q8WUT9 341 aaPredicted RBP5.61□□□□□ -1.51
ITGB1-214ENST00000488427 DPF2Q92785 391 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 HOOK2Q96ED9 719 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 CEP95Q96GE4 821 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 TMX3Q96JJ7 454 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 SORCS2Q96PQ0 1159 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 C11orf54Q9H0W9 315 aaPredicted RBP5.61□□□□□ -1.51
ITGB1-214ENST00000488427 SORCS3Q9UPU3 1222 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 ATP11BQ9Y2G3 1177 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 IPPQ9Y573 584 aa5.61□□□□□ -1.51
ITGB1-214ENST00000488427 PBRM1Q86U86 1689 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 PTPRMP28827 1452 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 PPM1GO15355 546 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-214ENST00000488427 FZD7O75084 574 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 FTH1P19P0C7X4 201 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 MAKP20794 623 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 CYP2C19P33261 490 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 ALDH1A3P47895 512 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 TOB2Q14106 344 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-214ENST00000488427 LSM12Q3MHD2 195 aaKnown RBP5.6□□□□□ -1.51
ITGB1-214ENST00000488427 SPDYE7PQ495Y7 208 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 DACT2Q5SW24 774 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 ZNF529Q6P280 563 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 GDF7Q7Z4P5 450 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 ZNF276Q8N554 614 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 FAM167AQ96KS9 214 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 PACSIN1Q9BY11 444 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 CPEB1Q9BZB8 566 aaKnown RBP5.6□□□□□ -1.51
ITGB1-214ENST00000488427 LDAHQ9H6V9 325 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 METTL14Q9HCE5 456 aaKnown RBP5.6□□□□□ -1.51
ITGB1-214ENST00000488427 IP6K2Q9UHH9 426 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 ZNF180Q9UJW8 692 aa5.6□□□□□ -1.51
ITGB1-214ENST00000488427 REXO2Q9Y3B8 237 aaKnown RBP5.6□□□□□ -1.51
ITGB1-214ENST00000488427 SHROOM2Q13796 1616 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 ATRNL1Q5VV63 1379 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 OFD1O75665 1012 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 HAUS5O94927 633 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 GNAI3P08754 354 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 HSPA6P17066 643 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 TACR2P21452 398 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 GDF5P43026 501 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 SLC6A9P48067 706 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 HMGA2P52926 109 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 GNAI1P63096 354 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 NHLH2Q02577 135 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 ABHD18Q0P651 414 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 PABPC1LQ4VXU2 614 aaKnown RBP5.59□□□□□ -1.51
ITGB1-214ENST00000488427 FOXR2Q6PJQ5 311 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 FITM2Q8N6M3 262 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 C3orf20Q8ND61 904 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms