RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 STRN3Q13033 797 aa21.17■□□□□ 0.98
CD55-209ENST00000488171 ACAP3Q96P50 834 aa21.17■□□□□ 0.98
CD55-209ENST00000488171 KCNK12Q9HB15 430 aa21.17■□□□□ 0.98
CD55-209ENST00000488171 BLOC1S4Q9NUP1 217 aa21.17■□□□□ 0.98
CD55-209ENST00000488171 KCNG1Q9UIX4 513 aa21.17■□□□□ 0.98
CD55-209ENST00000488171 TOM1L1O75674 476 aa21.16■□□□□ 0.98
CD55-209ENST00000488171 BMP15O95972 392 aa21.16■□□□□ 0.98
CD55-209ENST00000488171 HARSP12081 509 aaKnown RBP21.16■□□□□ 0.98
CD55-209ENST00000488171 KCNE1P15382 129 aa21.16■□□□□ 0.98
CD55-209ENST00000488171 AVPR2P30518 371 aa21.16■□□□□ 0.98
CD55-209ENST00000488171 SF3A1Q15459 793 aaKnown RBP21.16■□□□□ 0.98
CD55-209ENST00000488171 PDXDC1Q6P996 788 aa21.16■□□□□ 0.98
CD55-209ENST00000488171 STAMQ92783 540 aa21.16■□□□□ 0.98
CD55-209ENST00000488171 MYADMQ96S97 322 aa21.16■□□□□ 0.98
CD55-209ENST00000488171 PIDD1Q9HB75 910 aa21.16■□□□□ 0.98
CD55-209ENST00000488171 CNTN3Q9P232 1028 aa21.16■□□□□ 0.98
CD55-209ENST00000488171 I3L4J1 428 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 TKTP29401 623 aaKnown RBP21.15■□□□□ 0.98
CD55-209ENST00000488171 GBP2P32456 591 aaPredicted RBP21.15■□□□□ 0.98
CD55-209ENST00000488171 UBA7P41226 1012 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 BRCC3P46736 316 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 NCKAP1LP55160 1127 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 TDGQ13569 410 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 NOLC1Q14978 699 aaKnown RBP eCLIP21.15■□□□□ 0.98
CD55-209ENST00000488171 RSPO2Q6UXX9 243 aaPredicted RBP21.15■□□□□ 0.98
CD55-209ENST00000488171 ZPBP2Q6X784 338 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 CALML4Q96GE6 196 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 REEP2Q9BRK0 252 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 HAPLN2Q9GZV7 340 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 SLC38A7Q9NVC3 462 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 ANKFY1Q9P2R3 1169 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 MTRRQ9UBK8 725 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 ODF2LQ9ULJ1 636 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 CITO14578 2027 aa21.15■□□□□ 0.98
CD55-209ENST00000488171 VPS37CA5D8V6 355 aaPredicted RBP21.14■□□□□ 0.98
CD55-209ENST00000488171 LONP1P36776 959 aaKnown RBP21.14■□□□□ 0.98
CD55-209ENST00000488171 RAB33AQ14088 237 aa21.14■□□□□ 0.98
CD55-209ENST00000488171 KARSQ15046 597 aaKnown RBP21.14■□□□□ 0.98
CD55-209ENST00000488171 SEZ6Q53EL9 994 aa21.14■□□□□ 0.98
CD55-209ENST00000488171 GPBP1Q86WP2 473 aa21.14■□□□□ 0.98
CD55-209ENST00000488171 KCNN1Q92952 543 aa21.14■□□□□ 0.98
CD55-209ENST00000488171 C18orf25Q96B23 403 aaPredicted RBP21.14■□□□□ 0.98
CD55-209ENST00000488171 DDX27Q96GQ7 796 aaKnown RBP21.14■□□□□ 0.98
CD55-209ENST00000488171 PRRX2Q99811 253 aa21.14■□□□□ 0.98
CD55-209ENST00000488171 IGSF9Q9P2J2 1179 aa21.14■□□□□ 0.98
CD55-209ENST00000488171 LARSQ9P2J5 1176 aaKnown RBP21.14■□□□□ 0.98
CD55-209ENST00000488171 EPS15L1Q9UBC2 864 aa21.14■□□□□ 0.98
CD55-209ENST00000488171 DUSP12Q9UNI6 340 aa21.14■□□□□ 0.98
CD55-209ENST00000488171 PDCD11Q14690 1871 aaKnown RBP21.14■□□□□ 0.97
CD55-209ENST00000488171 PODXLO00592 558 aa21.13■□□□□ 0.97
CD55-209ENST00000488171 TRAPPC3O43617 180 aa21.13■□□□□ 0.97
CD55-209ENST00000488171 C8AP07357 584 aa21.13■□□□□ 0.97
CD55-209ENST00000488171 PLCG1P19174 1290 aa21.13■□□□□ 0.97
CD55-209ENST00000488171 OR1D2P34982 312 aa21.13■□□□□ 0.97
CD55-209ENST00000488171 MCL1Q07820 350 aa21.13■□□□□ 0.97
CD55-209ENST00000488171 TCF15Q12870 199 aa21.13■□□□□ 0.97
CD55-209ENST00000488171 SLC10A6Q3KNW5 377 aa21.13■□□□□ 0.97
CD55-209ENST00000488171 RSAD2Q8WXG1 361 aa21.13■□□□□ 0.97
CD55-209ENST00000488171 DOCK8Q8NF50 2099 aa21.13■□□□□ 0.97
CD55-209ENST00000488171 HNRNPA1P09651 372 aaKnown RBP eCLIP21.12■□□□□ 0.97
CD55-209ENST00000488171 ZNF131P52739 623 aa21.12■□□□□ 0.97
CD55-209ENST00000488171 DHX8Q14562 1220 aaKnown RBP21.12■□□□□ 0.97
CD55-209ENST00000488171 MCM6Q14566 821 aa21.12■□□□□ 0.97
CD55-209ENST00000488171 LIN9Q5TKA1 542 aa21.12■□□□□ 0.97
CD55-209ENST00000488171 HAUS6Q7Z4H7 955 aa21.12■□□□□ 0.97
CD55-209ENST00000488171 ALYREFQ86V81 257 aaKnown RBP21.12■□□□□ 0.97
CD55-209ENST00000488171 RAD54LQ92698 747 aa21.12■□□□□ 0.97
CD55-209ENST00000488171 BACE2Q9Y5Z0 518 aa21.12■□□□□ 0.97
CD55-209ENST00000488171 CLIC4Q9Y696 253 aa21.12■□□□□ 0.97
CD55-209ENST00000488171 CDY1Q9Y6F8 540 aa21.12■□□□□ 0.97
CD55-209ENST00000488171 ZDBF2Q9HCK1 2354 aa21.12■□□□□ 0.97
CD55-209ENST00000488171 H0YCG3 227 aa21.11■□□□□ 0.97
CD55-209ENST00000488171 CLDN3O15551 220 aa21.11■□□□□ 0.97
CD55-209ENST00000488171 PDCP20941 246 aa21.11■□□□□ 0.97
CD55-209ENST00000488171 HOXA9P31269 272 aa21.11■□□□□ 0.97
CD55-209ENST00000488171 PTPN5P54829 565 aa21.11■□□□□ 0.97
CD55-209ENST00000488171 PTPAQ15257 358 aa21.11■□□□□ 0.97
CD55-209ENST00000488171 PPM1LQ5SGD2 360 aa21.11■□□□□ 0.97
CD55-209ENST00000488171 AXDND1Q5T1B0 1012 aaPredicted RBP21.11■□□□□ 0.97
CD55-209ENST00000488171 ANKS3Q6ZW76 656 aa21.11■□□□□ 0.97
CD55-209ENST00000488171 GET4Q7L5D6 327 aaPredicted RBP21.11■□□□□ 0.97
CD55-209ENST00000488171 GRASPQ7Z6J2 395 aaPredicted RBP21.11■□□□□ 0.97
CD55-209ENST00000488171 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.11■□□□□ 0.97
CD55-209ENST00000488171 CCL16O15467 120 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 NARSO43776 548 aaKnown RBP21.1■□□□□ 0.97
CD55-209ENST00000488171 LAMP2P13473 410 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 RPL9P32969 192 aaKnown RBP21.1■□□□□ 0.97
CD55-209ENST00000488171 NTHL1P78549 312 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 TMEM105Q8N8V8 129 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 SLC7A14Q8TBB6 771 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 BACH2Q9BYV9 841 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 CCSER1Q9C0I3 900 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 FAM13AO94988 1023 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 CXCL8P10145 99 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 SYT1P21579 422 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 FSHRP23945 695 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 RESTQ13127 1097 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 UVSSAQ2YD98 709 aa21.1■□□□□ 0.97
CD55-209ENST00000488171 VARS2Q5ST30 1063 aaKnown RBP21.1■□□□□ 0.97
CD55-209ENST00000488171 USP49Q70CQ1 688 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms