RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 FRMD3A2A2Y4 597 aa18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 TMEM189-UBE2V1I3L0A0 370 aa18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 HOXB8P17481 243 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 RPL17P18621 184 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 KLRC2P26717 231 aa18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 LIG4P49917 911 aa18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 YARSP54577 528 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 KCNA1Q09470 495 aa18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 USP41Q3LFD5 358 aa18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 RARS2Q5T160 578 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 RIN2Q8WYP3 895 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 BICD1Q96G01 975 aa18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 EMILIN2Q9BXX0 1053 aa18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 TOPORSQ9NS56 1045 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 TBC1D7Q9P0N9 293 aa18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 RCOR1Q9UKL0 485 aa18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 SF3B1O75533 1304 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCHCR1-214ENST00000486060 TECTAO75443 2155 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 A0A0B4J269 797 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 TTC26A0AVF1 554 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 LOC730098B7Z3J9 87 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 I3L4J1 428 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 HNRNPDLO14979 420 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 SRGAP2BP0DMP2 458 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 MYBP10242 640 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 SSTR3P32745 418 aaPredicted RBP18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 BRCC3P46736 316 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 SPAG1Q07617 926 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 CBX2Q14781 532 aaPredicted RBP18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 FAM171A1Q5VUB5 890 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 FBXL18Q96ME1 805 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 ADAM7Q9H2U9 754 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 POMKQ9H5K3 350 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 KBTBD4Q9NVX7 518 aa18.17■□□□□ 0.5
CCHCR1-214ENST00000486060 OGTO15294 1046 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 ADAM12O43184 909 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 B3GAT3O94766 335 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 SCP2P22307 547 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 MATR3P43243 847 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 ZBTB6Q15916 424 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 ENOX2Q16206 610 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 TPRNQ4KMQ1 711 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 ATL3Q6DD88 541 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 KIAA1841Q6NSI8 718 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 DCLRE1AQ6PJP8 1040 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 PPFIBP1Q86W92 1011 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 GLYCTKQ8IVS8 523 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 GPR65Q8IYL9 337 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 TMEM87AQ8NBN3 555 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 LNX1Q8TBB1 728 aaPredicted RBP18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 KCNG4Q8TDN1 519 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 DHX58Q96C10 678 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 PHF7Q9BWX1 381 aaPredicted RBP18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 C11orf16Q9NQ32 467 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 DZANK1Q9NVP4 752 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 FNIP2Q9P278 1114 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 TUBGCP4Q9UGJ1 667 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 SSX2IPQ9Y2D8 614 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 STYXL1Q9Y6J8 313 aa18.16■□□□□ 0.5
CCHCR1-214ENST00000486060 LACTBL1A8MY62 500 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 PI4K2BG5E9Z4 385 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 ADRB2P07550 413 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 CLTAP09496 248 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 SPATA31D3P0C874 917 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 IDEP14735 1019 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 GAP43P17677 238 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 FGFR3P22607 806 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 ADSSP30520 456 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 RESP18Q5W5W9 173 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 LILRA6Q6PI73 481 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 RSPO2Q6UXX9 243 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 TMC5Q6UXY8 1006 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 SPATA31D4Q6ZUB0 917 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 PALB2Q86YC2 1186 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 GLIS3Q8NEA6 775 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 ZSWIM2Q8NEG5 633 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 PIK3R5Q8WYR1 880 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 HPS3Q969F9 1004 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 UROC1Q96N76 676 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 CLSTN3Q9BQT9 956 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 TTPALQ9BTX7 342 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 MRPL44Q9H9J2 332 aaKnown RBP18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 MAN1C1Q9NR34 630 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 OLFML3Q9NRN5 406 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 PANK4Q9NVE7 773 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 SEL1LQ9UBV2 794 aa18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 CPSF3Q9UKF6 684 aaKnown RBP18.15■□□□□ 0.5
CCHCR1-214ENST00000486060 PODXLO00592 558 aa18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 TGM5O43548 720 aa18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 ADH1AP07327 375 aa18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 TKTP29401 623 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 CASP1P29466 404 aa18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 ME1P48163 572 aa18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 GUCY2FP51841 1108 aa18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 ITIH3Q06033 890 aa18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 HERC4Q5GLZ8 1057 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 CRELD2Q6UXH1 353 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 CEP57Q86XR8 500 aa18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 RNF135Q8IUD6 432 aa18.14■□□□□ 0.49
CCHCR1-214ENST00000486060 RPGRIP1Q96KN7 1286 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms