RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 PHOSPHO2Q8TCD6 241 aa17.16■□□□□ 0.34
APOE-205ENST00000485628 PRO3102Q9H379 93 aa17.16■□□□□ 0.34
APOE-205ENST00000485628 KLK14Q9P0G3 267 aa17.16■□□□□ 0.34
APOE-205ENST00000485628 PARP2Q9UGN5 583 aa17.16■□□□□ 0.34
APOE-205ENST00000485628 RANBP2P49792 3224 aaKnown RBP17.15■□□□□ 0.34
APOE-205ENST00000485628 H0YGN5 161 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 GOLGA6L19H0YKK7 550 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 AMHP03971 560 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 NFICP08651 508 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 TRIM49P0CI25 452 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 TRIM49CP0CI26 452 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 FGFR1P11362 822 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 KRT13P13646 458 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 PRKCSHP14314 528 aaPredicted RBP17.15■□□□□ 0.34
APOE-205ENST00000485628 CYP3A5P20815 502 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 MLH1P40692 756 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 COPB1P53618 953 aaKnown RBP17.15■□□□□ 0.34
APOE-205ENST00000485628 AP3M2P53677 418 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 HTRA4P83105 476 aaPredicted RBP17.15■□□□□ 0.34
APOE-205ENST00000485628 DSC1Q08554 894 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 KCNH2Q12809 1159 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 SCARA3Q6AZY7 606 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 SV2AQ7L0J3 742 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 LMO3Q8TAP4 145 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 CCDC127Q96BQ5 260 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 NAP1L5Q96NT1 182 aaPredicted RBP17.15■□□□□ 0.34
APOE-205ENST00000485628 APOL6Q9BWW8 343 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 TMEM117Q9H0C3 514 aa17.15■□□□□ 0.34
APOE-205ENST00000485628 RTN4Q9NQC3 1192 aaKnown RBP17.15■□□□□ 0.34
APOE-205ENST00000485628 MAGEC2Q9UBF1 373 aaPredicted RBP17.15■□□□□ 0.34
APOE-205ENST00000485628 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.15■□□□□ 0.34
APOE-205ENST00000485628 ANO9A1A5B4 782 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 GTPBP10A4D1E9 387 aaKnown RBP17.14■□□□□ 0.33
APOE-205ENST00000485628 P4HA2O15460 535 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 HOXA2O43364 376 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 LRPAP1P30533 357 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 FANCCQ00597 558 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 SOX4Q06945 474 aaPredicted RBP17.14■□□□□ 0.33
APOE-205ENST00000485628 NR1I3Q14994 352 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 DUOXA2Q1HG44 320 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 CBWD6Q4V339 395 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 VWA3BQ502W6 1294 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 NOMO2Q5JPE7 1267 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 CBWD3Q5JTY5 395 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 CBWD5Q5RIA9 395 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 C9orf50Q5SZB4 431 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 GLB1LQ6UWU2 654 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 USP37Q86T82 979 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 C1orf127Q8N9H9 656 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 FAM84AQ96KN4 292 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 NDST4Q9H3R1 872 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 TMEM8AQ9HCN3 771 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 SIX4Q9UIU6 781 aa17.14■□□□□ 0.33
APOE-205ENST00000485628 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.14■□□□□ 0.33
APOE-205ENST00000485628 LGALS16A8MUM7 142 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 B4GALT3O60512 393 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 GJB5O95377 273 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 VNN1O95497 513 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 THP07101 528 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 LINC00271P0C7V0 271 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 DLATP10515 647 aaKnown RBP17.13■□□□□ 0.33
APOE-205ENST00000485628 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
APOE-205ENST00000485628 PBX1P40424 430 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 MTIF2P46199 727 aaKnown RBP17.13■□□□□ 0.33
APOE-205ENST00000485628 FMO5P49326 533 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 SCNN1GP51170 649 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 TPM4P67936 248 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 GRIK3Q13003 919 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 TMEM132DQ14C87 1099 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 SHHQ15465 462 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 TDRD10Q5VZ19 366 aaKnown RBP17.13■□□□□ 0.33
APOE-205ENST00000485628 HELQQ8TDG4 1101 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 FNBP1Q96RU3 617 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 SLC9A7Q96T83 725 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 TBC1D13Q9NVG8 400 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 TAB2Q9NYJ8 693 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 KANSL3Q9P2N6 904 aa17.13■□□□□ 0.33
APOE-205ENST00000485628 PIRO00625 290 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 STX10O60499 249 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 CST3P01034 146 aaPredicted RBP17.12■□□□□ 0.33
APOE-205ENST00000485628 AFPP02771 609 aaKnown RBP17.12■□□□□ 0.33
APOE-205ENST00000485628 GCLMP48507 274 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 GATMP50440 423 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 EPC2Q52LR7 807 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 GLRA4Q5JXX5 417 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 LMBRD2Q68DH5 695 aaPredicted RBP17.12■□□□□ 0.33
APOE-205ENST00000485628 KRT39Q6A163 491 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 TRAPPC11Q7Z392 1133 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 COLGALT2Q8IYK4 626 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 TMEM130Q8N3G9 435 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 RNF169Q8NCN4 708 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
APOE-205ENST00000485628 CACTINQ8WUQ7 758 aaKnown RBP17.12■□□□□ 0.33
APOE-205ENST00000485628 C18orf25Q96B23 403 aaPredicted RBP17.12■□□□□ 0.33
APOE-205ENST00000485628 KIF12Q96FN5 646 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 ERGIC2Q96RQ1 377 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 MTMR12Q9C0I1 747 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 CWH43Q9H720 699 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 LRFN2Q9ULH4 789 aa17.12■□□□□ 0.33
APOE-205ENST00000485628 UBQLN1Q9UMX0 589 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms